RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 VCPKMTQ9H867 229 aa23.18■■□□□ 1.3
CDH5-202ENST00000539168 RIC8AQ9NPQ8 531 aa23.18■■□□□ 1.3
CDH5-202ENST00000539168 A0A1W2PRG0 241 aa23.17■■□□□ 1.3
CDH5-202ENST00000539168 ZNF174Q15697 407 aa23.17■■□□□ 1.3
CDH5-202ENST00000539168 SYDE2Q5VT97 1194 aa23.17■■□□□ 1.3
CDH5-202ENST00000539168 CUL5Q93034 780 aa23.17■■□□□ 1.3
CDH5-202ENST00000539168 KCNH3Q9ULD8 1083 aa23.17■■□□□ 1.3
CDH5-202ENST00000539168 PHF20L1A8MW92 1017 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 LMOD1P29536 600 aaPredicted RBP23.16■■□□□ 1.3
CDH5-202ENST00000539168 SLC16A2P36021 539 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 TYRO3Q06418 890 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 CHURC1Q8WUH1 139 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 ZNF341Q9BYN7 854 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 PITPNM2Q9BZ72 1349 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 TMEM232C9JQI7 657 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 STAT2P52630 851 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 IKQ13123 557 aaPredicted RBP23.16■■□□□ 1.3
CDH5-202ENST00000539168 PTGDRQ13258 359 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 CDC37Q16543 378 aaPredicted RBP23.16■■□□□ 1.3
CDH5-202ENST00000539168 QRICH1Q2TAL8 776 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 FAM160B2Q86V87 743 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 CDAN1Q8IWY9 1227 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 CLIC6Q96NY7 704 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
CDH5-202ENST00000539168 KANK3Q6NY19 840 aa23.15■■□□□ 1.3
CDH5-202ENST00000539168 CKAP2LQ8IYA6 745 aa23.15■■□□□ 1.3
CDH5-202ENST00000539168 COA7Q96BR5 231 aa23.15■■□□□ 1.3
CDH5-202ENST00000539168 NAP1L4Q99733 375 aaKnown RBP23.15■■□□□ 1.3
CDH5-202ENST00000539168 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
CDH5-202ENST00000539168 ANGEL2Q5VTE6 544 aaKnown RBP23.14■■□□□ 1.29
CDH5-202ENST00000539168 NEK8Q86SG6 692 aa23.14■■□□□ 1.29
CDH5-202ENST00000539168 RASGRP4Q8TDF6 673 aa23.14■■□□□ 1.29
CDH5-202ENST00000539168 USP25Q9UHP3 1055 aa23.14■■□□□ 1.29
CDH5-202ENST00000539168 MCM7P33993 719 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 PRPHP41219 470 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 ECE1P42892 770 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
CDH5-202ENST00000539168 INF2Q27J81 1249 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 NOM1Q5C9Z4 860 aaKnown RBP23.13■■□□□ 1.29
CDH5-202ENST00000539168 ACER1Q8TDN7 264 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 LPAR1Q92633 364 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
CDH5-202ENST00000539168 PCDHA1Q9Y5I3 950 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 STX1AQ16623 288 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 FBXO11Q86XK2 927 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 CSRNP2Q9H175 543 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 PSTPIP2Q9H939 334 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 FEM1BQ9UK73 627 aa23.13■■□□□ 1.29
CDH5-202ENST00000539168 ATAD5Q96QE3 1844 aa23.12■■□□□ 1.29
CDH5-202ENST00000539168 PPP1R11O60927 126 aaPredicted RBP23.12■■□□□ 1.29
CDH5-202ENST00000539168 LONP1P36776 959 aaKnown RBP23.12■■□□□ 1.29
CDH5-202ENST00000539168 SUPT20HL1Q3ZLR7 823 aa23.12■■□□□ 1.29
CDH5-202ENST00000539168 FAM200AQ8TCP9 573 aa23.12■■□□□ 1.29
CDH5-202ENST00000539168 ANO10Q9NW15 660 aa23.12■■□□□ 1.29
CDH5-202ENST00000539168 ZNF112Q9UJU3 913 aa23.12■■□□□ 1.29
CDH5-202ENST00000539168 CLK2P49760 499 aaKnown RBP23.11■■□□□ 1.29
CDH5-202ENST00000539168 CNNM3Q8NE01 707 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 TRPM4Q8TD43 1214 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 FEZ1Q99689 392 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 KIAA1683Q9H0B3 1180 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 AS3MTQ9HBK9 375 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 KIAA1468Q9P260 1216 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 BIN2Q9UBW5 565 aaPredicted RBP23.11■■□□□ 1.29
CDH5-202ENST00000539168 PRR12Q9ULL5 1215 aa23.11■■□□□ 1.29
CDH5-202ENST00000539168 ADAMTS3O15072 1205 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 TXLNAP40222 546 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 NBPF12Q5TAG4 269 aaPredicted RBP23.1■■□□□ 1.29
CDH5-202ENST00000539168 DPY19L2Q6NUT2 758 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 KRBA2Q6ZNG9 492 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 NUP88Q99567 741 aaPredicted RBP23.1■■□□□ 1.29
CDH5-202ENST00000539168 GGA3Q9NZ52 723 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 MRVI1Q9Y6F6 885 aa23.1■■□□□ 1.29
CDH5-202ENST00000539168 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
CDH5-202ENST00000539168 ASTN2O75129 1339 aaPredicted RBP23.09■■□□□ 1.29
CDH5-202ENST00000539168 EPS15P42566 896 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 USP14P54578 494 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 CCDC173Q0VFZ6 552 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 AP3B2Q13367 1082 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 JAKMIP3Q5VZ66 844 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 DTHD1Q6ZMT9 781 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 C4orf32Q8N8J7 132 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 RNF214Q8ND24 703 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 TBCKQ8TEA7 893 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 WNT7AO00755 349 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 WDR46O15213 610 aaKnown RBP23.09■■□□□ 1.29
CDH5-202ENST00000539168 YBX3P16989 372 aaKnown RBP eCLIP23.09■■□□□ 1.29
CDH5-202ENST00000539168 FAM83BQ5T0W9 1011 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 SCYL3Q8IZE3 742 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 SPICE1Q8N0Z3 855 aa23.09■■□□□ 1.29
CDH5-202ENST00000539168 NAT10Q9H0A0 1025 aaKnown RBP23.09■■□□□ 1.29
CDH5-202ENST00000539168 VWA3AA6NCI4 1184 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 FOSP01100 380 aaPredicted RBP23.08■■□□□ 1.29
CDH5-202ENST00000539168 GCFC2P16383 781 aaKnown RBP23.08■■□□□ 1.29
CDH5-202ENST00000539168 GRIN1Q05586 938 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 AK8Q96MA6 479 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 WDR18Q9BV38 432 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 PNMA2Q9UL42 364 aa23.08■■□□□ 1.29
CDH5-202ENST00000539168 NEMFO60524 1076 aa23.07■■□□□ 1.28
CDH5-202ENST00000539168 CCNT1O60563 726 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms