RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 CUL4AQ13619 759 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 SLC35G1Q2M3R5 365 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 ZNF713Q8N859 430 aaPredicted RBP16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 CPVLQ9H3G5 476 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 RNF186Q9NXI6 227 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 RBPJLQ9UBG7 517 aa16.32■□□□□ 0.2
PRKAB1-203ENST00000537400 FOXN1O15353 648 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 CCNA1P78396 465 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 ST3GAL1Q11201 340 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 CRHR2Q13324 411 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 BECN1Q14457 450 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 NOM1Q5C9Z4 860 aaKnown RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 INTS4Q96HW7 963 aaKnown RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 VAT1LQ9HCJ6 419 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-203ENST00000537400 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 SLC25A27O95847 323 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 BCRP11274 1271 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 ERVK-9P63128 1117 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 ERVK-24P63145 666 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 QRICH1Q2TAL8 776 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 POTEEQ6S8J3 1075 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 NSUN7Q8NE18 718 aaKnown RBP16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 WASF1Q92558 559 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 PIGSQ96S52 555 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 MAF1Q9H063 256 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 SPATC1LQ9H0A9 340 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 BTBD7Q9P203 1132 aa16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
PRKAB1-203ENST00000537400 ZNF536O15090 1300 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 PTPDC1A2A3K4 754 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 CNMDO75829 334 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 DEXIO95424 95 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 STAT3P40763 770 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 FBXO11Q86XK2 927 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 PHKBQ93100 1093 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 TXNRD2Q9NNW7 524 aa16.29■□□□□ 0.2
PRKAB1-203ENST00000537400 ABCB11O95342 1321 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 TRPA1O75762 1119 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 SCG2P13521 617 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 CHST13Q8NET6 341 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 TSHZ2Q9NRE2 1034 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
PRKAB1-203ENST00000537400 PKN1Q16512 942 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 SAMD3Q8N6K7 520 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 MROH8Q9H579 483 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 ORC3Q9UBD5 711 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 CPA4Q9UI42 421 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 PCDHA1Q9Y5I3 950 aa16.27■□□□□ 0.2
PRKAB1-203ENST00000537400 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 XBP1P17861 261 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 MAPK4P31152 587 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 SNAP25P60880 206 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 PLS1Q14651 629 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 Q3C1V9 767 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
PRKAB1-203ENST00000537400 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms