RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 ZNF792Q3KQV3 632 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 FAM109BQ6ICB4 259 aaPredicted RBP11.08□□□□□ -0.64
VPS26B-207ENST00000532160 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 XPNPEP3Q9NQH7 507 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
VPS26B-207ENST00000532160 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
VPS26B-207ENST00000532160 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
VPS26B-207ENST00000532160 NDUFB10O96000 172 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 ZNF865P0CJ78 1059 aaPredicted RBP11.07□□□□□ -0.64
VPS26B-207ENST00000532160 TLE2Q04725 743 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 KCTD2Q14681 263 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 GIMAP6Q6P9H5 292 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
VPS26B-207ENST00000532160 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
VPS26B-207ENST00000532160 A0A1W2PQ45 241 aaPredicted RBP11.06□□□□□ -0.64
VPS26B-207ENST00000532160 A0A1W2PQY0 241 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 PRDM1O75626 825 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 PPARAQ07869 468 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 ALX1Q15699 326 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
VPS26B-207ENST00000532160 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 SLF1Q9BQI6 1058 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 DIS3Q9Y2L1 958 aaKnown RBP11.06□□□□□ -0.64
VPS26B-207ENST00000532160 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 TAF6LQ9Y6J9 622 aa11.06□□□□□ -0.64
VPS26B-207ENST00000532160 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 F5H6K3 240 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 PQBP1O60828 265 aaKnown RBP11.05□□□□□ -0.64
VPS26B-207ENST00000532160 ADAMTS4O75173 837 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 CLTBP09497 229 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 AKR1A1P14550 325 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 COPB2P35606 906 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 EPHB4P54760 987 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 KLRC3Q07444 240 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 RNF180Q86T96 592 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 TBC1D10CQ8IV04 446 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 MKNK2Q9HBH9 465 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 NYAP2Q9P242 653 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
VPS26B-207ENST00000532160 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 ZNF213O14771 459 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 SNAI1O95863 264 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CYP21A2P08686 494 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 RRP12Q5JTH9 1297 aaKnown RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CEP95Q96GE4 821 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 FGD4Q96M96 766 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CDX2Q99626 313 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 COL25A1Q9BXS0 654 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 TTYH1Q9H313 450 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CLIP2Q9UDT6 1046 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
VPS26B-207ENST00000532160 CNPY2Q9Y2B0 182 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 SYNGAP1Q96PV0 1343 aa11.04□□□□□ -0.64
VPS26B-207ENST00000532160 SLC27A2O14975 620 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 KIAA0355O15063 1070 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 ADCY6O43306 1168 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 REC8O95072 547 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 ACLYP53396 1101 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
VPS26B-207ENST00000532160 NECTIN1Q15223 517 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
VPS26B-207ENST00000532160 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
VPS26B-207ENST00000532160 KLHDC9Q8NEP7 349 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 RAVER2Q9HCJ3 691 aaKnown RBP11.03□□□□□ -0.64
VPS26B-207ENST00000532160 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 ZMYM6O95789 1325 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 NEDD4P46934 1319 aa11.03□□□□□ -0.64
VPS26B-207ENST00000532160 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 RAG1P15918 1043 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
VPS26B-207ENST00000532160 KCNA10Q16322 511 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 AKNAD1Q5T1N1 836 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MAMDC4Q6UXC1 1216 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms