RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ABHD16BQ9H3Z7 469 aa25.2■■□□□ 1.62
CHKA-206ENST00000531341 EPB41L4AQ9HCS5 686 aaPredicted RBP25.2■■□□□ 1.62
CHKA-206ENST00000531341 PRDM1O75626 825 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 PTGS1P23219 599 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 GNASQ5JWF2 1037 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.19■■□□□ 1.62
CHKA-206ENST00000531341 ARMCX2Q7L311 632 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 CCDC144CPQ8IYA2 1237 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 PCSK9Q8NBP7 692 aaKnown RBP25.19■■□□□ 1.62
CHKA-206ENST00000531341 PRDM12Q9H4Q4 367 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 DDX19BQ9UMR2 479 aa25.19■■□□□ 1.62
CHKA-206ENST00000531341 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.18■■□□□ 1.62
CHKA-206ENST00000531341 BEX3Q00994 111 aa25.18■■□□□ 1.62
CHKA-206ENST00000531341 CNTN2Q02246 1040 aa25.18■■□□□ 1.62
CHKA-206ENST00000531341 PPIGQ13427 754 aaKnown RBP eCLIP25.18■■□□□ 1.624e-7■■□□□ 13.7
CHKA-206ENST00000531341 CCDC129Q6ZRS4 1044 aa25.18■■□□□ 1.62
CHKA-206ENST00000531341 MKL1Q969V6 931 aa25.18■■□□□ 1.62
CHKA-206ENST00000531341 ASTN1O14525 1302 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 MROH7Q68CQ1 1323 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 A0A0U1RQG5 324 aaPredicted RBP25.17■■□□□ 1.62
CHKA-206ENST00000531341 CYP2C18P33260 490 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 ADGRE1Q14246 886 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 LRRC47Q8N1G4 583 aaKnown RBP25.17■■□□□ 1.62
CHKA-206ENST00000531341 CEP95Q96GE4 821 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 HOMER2Q9NSB8 354 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 CXXC1Q9P0U4 656 aaPredicted RBP25.17■■□□□ 1.62
CHKA-206ENST00000531341 DDX49Q9Y6V7 483 aaKnown RBP25.17■■□□□ 1.62
CHKA-206ENST00000531341 MYH7P12883 1935 aa25.17■■□□□ 1.62
CHKA-206ENST00000531341 CD4P01730 458 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 MS4A1P11836 297 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 TMEM199Q8N511 208 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 LRRCC1Q9C099 1032 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 SPC25Q9HBM1 224 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 MTMR4Q9NYA4 1195 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 FEM1BQ9UK73 627 aa25.16■■□□□ 1.62
CHKA-206ENST00000531341 CTDP1Q9Y5B0 961 aaPredicted RBP25.16■■□□□ 1.62
CHKA-206ENST00000531341 UMODL1Q5DID0 1318 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 TSHZ3Q63HK5 1081 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 GIMAP6Q6P9H5 292 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 MIER1Q8N108 512 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 CHST13Q8NET6 341 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 CHMP4CQ96CF2 233 aa25.15■■□□□ 1.62
CHKA-206ENST00000531341 TNFRSF10AO00220 468 aa25.14■■□□□ 1.62
CHKA-206ENST00000531341 NKX3-2P78367 333 aa25.14■■□□□ 1.62
CHKA-206ENST00000531341 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
CHKA-206ENST00000531341 GAS2L1Q99501 681 aaPredicted RBP25.14■■□□□ 1.62
CHKA-206ENST00000531341 MCM3APO60318 1980 aa25.14■■□□□ 1.61
CHKA-206ENST00000531341 GRIN2DO15399 1336 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 SOWAHBA6NEL2 793 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 M0R2C6 588 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 CCDC85BQ15834 202 aaPredicted RBP25.13■■□□□ 1.61
CHKA-206ENST00000531341 TMEM63BQ5T3F8 832 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 CXCL17Q6UXB2 119 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 FAM133AQ8N9E0 248 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 KBTBD3Q8NAB2 608 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 APPBP2Q92624 585 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 AGBL1Q96MI9 1066 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 ECHDC1Q9NTX5 307 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 FBXO40Q9UH90 709 aa25.13■■□□□ 1.61
CHKA-206ENST00000531341 ZNF536O15090 1300 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 GPAA1O43292 621 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 BMP3P12645 472 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 OAZ1P54368 228 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 SLFN13Q68D06 897 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 PSRC1Q6PGN9 363 aaPredicted RBP25.12■■□□□ 1.61
CHKA-206ENST00000531341 CCDC174Q6PII3 467 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 SLC43A3Q8NBI5 491 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 GMCL1P1Q8NEA9 526 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 NKX2-4Q9H2Z4 354 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 IL23AQ9NPF7 189 aa25.12■■□□□ 1.61
CHKA-206ENST00000531341 A1CFQ9NQ94 594 aaKnown RBP25.12■■□□□ 1.61
CHKA-206ENST00000531341 GNEQ9Y223 722 aaKnown RBP25.12■■□□□ 1.61
CHKA-206ENST00000531341 YBX2Q9Y2T7 364 aaKnown RBP25.12■■□□□ 1.61
CHKA-206ENST00000531341 TLR3O15455 904 aaKnown RBP25.11■■□□□ 1.61
CHKA-206ENST00000531341 RNF113AO15541 343 aaKnown RBP25.11■■□□□ 1.61
CHKA-206ENST00000531341 TTLL1O95922 423 aa25.11■■□□□ 1.61
CHKA-206ENST00000531341 TDO2P48775 406 aa25.11■■□□□ 1.61
CHKA-206ENST00000531341 TNFAIP2Q03169 654 aa25.11■■□□□ 1.61
CHKA-206ENST00000531341 HERVK_113Q902F9 699 aa25.11■■□□□ 1.61
CHKA-206ENST00000531341 RAPGEFL1Q9UHV5 662 aa25.11■■□□□ 1.61
CHKA-206ENST00000531341 MYH4Q9Y623 1939 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 TMEM232C9JQI7 657 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 CCL23P55773 120 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 SNAP25P60880 206 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 AKNAD1Q5T1N1 836 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 ACAD9Q9H845 621 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 PDGFCQ9NRA1 345 aa25.1■■□□□ 1.61
CHKA-206ENST00000531341 FGBP02675 491 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 APPP05067 770 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 SMPD1P17405 629 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 COL9A1P20849 921 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 NOL8Q76FK4 1167 aaKnown RBP25.09■■□□□ 1.61
CHKA-206ENST00000531341 OTOP2Q7RTS6 562 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 IFNL3Q8IZI9 196 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 ATXN2LQ8WWM7 1075 aaKnown RBP25.09■■□□□ 1.61
CHKA-206ENST00000531341 VWCEQ96DN2 955 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 ASB2Q96Q27 587 aa25.09■■□□□ 1.61
CHKA-206ENST00000531341 SEC62Q99442 399 aaKnown RBP25.09■■□□□ 1.61
CHKA-206ENST00000531341 TRPV6Q9H1D0 765 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms