RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 AGMOQ6ZNB7 445 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 C22orf34Q6ZV56 151 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 FLAD1Q8NFF5 587 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 PRDM7Q9NQW5 492 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 TPX2Q9ULW0 747 aaKnown RBP7.13□□□□□ -1.27
SVIP-202ENST00000525670 KIF20BQ96Q89 1820 aa7.13□□□□□ -1.27
SVIP-202ENST00000525670 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 FAM155AB1AL88 458 aaPredicted RBP7.12□□□□□ -1.27
SVIP-202ENST00000525670 CST3P01034 146 aaPredicted RBP7.12□□□□□ -1.27
SVIP-202ENST00000525670 GRK4P32298 578 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 ZC3H6P61129 1189 aaKnown RBP7.12□□□□□ -1.27
SVIP-202ENST00000525670 TMF1P82094 1093 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 SND1Q7KZF4 910 aaKnown RBP eCLIP7.12□□□□□ -1.27
SVIP-202ENST00000525670 NME9Q86XW9 330 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 MIPEPQ99797 713 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 RNF19AQ9NV58 838 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 PCDHB5Q9Y5E4 795 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 NRAPQ86VF7 1730 aa7.12□□□□□ -1.27
SVIP-202ENST00000525670 SEPT6Q14141 434 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
SVIP-202ENST00000525670 LETMD1Q6P1Q0 360 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 MFSD4AQ8N468 514 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 HSPA12BQ96MM6 686 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 MIR1-1HGQ9H1L0 117 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 SEMA3GQ9NS98 782 aa7.11□□□□□ -1.27
SVIP-202ENST00000525670 CCDC9Q9Y3X0 531 aaKnown RBP7.11□□□□□ -1.27
SVIP-202ENST00000525670 NSD3Q9BZ95 1437 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 LTN1O94822 1766 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 KIAA0232Q92628 1395 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 TTC21BQ7Z4L5 1316 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 FARP2O94887 1054 aaPredicted RBP7.1□□□□□ -1.27
SVIP-202ENST00000525670 RLBP1P12271 317 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 LIG3P49916 1009 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 PRAMEF13Q5VWM6 474 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 HDGFL2Q7Z4V5 671 aaPredicted RBP7.1□□□□□ -1.27
SVIP-202ENST00000525670 PRDM11Q9NQV5 511 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 COL14A1Q05707 1796 aaKnown RBP7.1□□□□□ -1.27
SVIP-202ENST00000525670 RGPD5Q99666 1765 aa7.1□□□□□ -1.27
SVIP-202ENST00000525670 CYP7A1P22680 504 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 TSNAXIP1Q2TAA8 658 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 ZNF648Q5T619 568 aaPredicted RBP7.09□□□□□ -1.27
SVIP-202ENST00000525670 CDKAL1Q5VV42 579 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 COX4I2Q96KJ9 171 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 ATP13A1Q9HD20 1204 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 PARP2Q9UGN5 583 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 CTNND2Q9UQB3 1225 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 CAPN6Q9Y6Q1 641 aa7.09□□□□□ -1.27
SVIP-202ENST00000525670 RGS12O14924 1447 aa7.09□□□□□ -1.28
SVIP-202ENST00000525670 CPSF1Q10570 1443 aaKnown RBP7.09□□□□□ -1.28
SVIP-202ENST00000525670 GLI3P10071 1580 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 SLIT3O75094 1523 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 NWD2Q9ULI1 1742 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 TFE3P19532 575 aaPredicted RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 FBLN1P23142 703 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 AFMP43652 599 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 JAG1P78504 1218 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 DAB2P98082 770 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 ZSWIM9Q86XI8 627 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 NPAS4Q8IUM7 802 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 XAGE3Q8WTP9 111 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 CARS2Q9HA77 564 aaKnown RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 USP35Q9P2H5 1018 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 EDC4Q6P2E9 1401 aaKnown RBP7.08□□□□□ -1.28
SVIP-202ENST00000525670 SSH2Q76I76 1423 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 ANKRD36BQ8N2N9 1353 aa7.08□□□□□ -1.28
SVIP-202ENST00000525670 SLIT2O94813 1529 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 NFAT5O94916 1531 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 USP19O94966 1318 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 KIF7Q2M1P5 1343 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 EP400Q96L91 3159 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 BCL9LQ86UU0 1499 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 FAM83GA6ND36 823 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 CBX7O95931 251 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 PGRP06401 933 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 KIR3DL1P43629 444 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 TNNT2P45379 298 aaPredicted RBP7.07□□□□□ -1.28
SVIP-202ENST00000525670 ST13P50502 369 aaKnown RBP7.07□□□□□ -1.28
SVIP-202ENST00000525670 PSMD2Q13200 908 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 KCNMB1Q16558 191 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
SVIP-202ENST00000525670 SLC6A19Q695T7 634 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 THAP5Q7Z6K1 395 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 AEBP1Q8IUX7 1158 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 TERF2IPQ9NYB0 399 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 FAM53CQ9NYF3 392 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 ATRNO75882 1429 aa7.07□□□□□ -1.28
SVIP-202ENST00000525670 LMO7Q8WWI1 1683 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms