RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 TDP2O95551 362 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 COPB1P53618 953 aaKnown RBP9.76□□□□□ -0.85
SREK1-215ENST00000524111 ATP2C1P98194 919 aaPredicted RBP9.76□□□□□ -0.85
SREK1-215ENST00000524111 CYP4A11Q02928 519 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 PLS1Q14651 629 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 SLC10A5Q5PT55 438 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 USP17L6PQ6QN14 398 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 POTEDQ86YR6 584 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 GDAP1L1Q96MZ0 367 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 FEZ1Q99689 392 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.76□□□□□ -0.85
SREK1-215ENST00000524111 PLEKHA4Q9H4M7 779 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 FLT1P17948 1338 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 STRCP1A6NGW2 1772 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 TCP10L2B9ZVM9 353 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 TRAF5O00463 557 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 ENC1O14682 589 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 PPP2R3AQ06190 1150 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 KMT5BQ4FZB7 885 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 CNGA4Q8IV77 575 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 TRIML1Q8N9V2 468 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 ZNF397Q8NF99 534 aaPredicted RBP9.76□□□□□ -0.85
SREK1-215ENST00000524111 WDR24Q96S15 920 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 SPA17Q15506 151 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 PTPROQ16827 1216 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 RC3H1Q5TC82 1133 aaKnown RBP9.76□□□□□ -0.85
SREK1-215ENST00000524111 C2CD5Q86YS7 1000 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 NLRC4Q9NPP4 1024 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 TFR2Q9UP52 801 aa9.76□□□□□ -0.85
SREK1-215ENST00000524111 PHACTR2O75167 634 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 SEC31AO94979 1220 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 CHRNA5P30532 468 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 LONP1P36776 959 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 CCDC122Q5T0U0 273 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 TRERF1Q96PN7 1200 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 PYM1Q9BRP8 204 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 KCNQ5Q9NR82 932 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.75□□□□□ -0.85
SREK1-215ENST00000524111 PCDHA1Q9Y5I3 950 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 CYTH3O43739 400 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 FCER1AP12319 257 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 MRPL12P52815 198 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 NFIAQ12857 509 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 FBXO38Q6PIJ6 1188 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 PSTPIP2Q9H939 334 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 PCDHA6Q9UN73 950 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 PCDHA8Q9Y5H6 950 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 USP17L10C9JJH3 530 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 MEIS1O00470 390 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 RAD17O75943 681 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 GRM4Q14833 912 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 SYCP1Q15431 976 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 PRR16Q569H4 304 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 HERC4Q5GLZ8 1057 aaPredicted RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 NCAPH2Q6IBW4 605 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 BPIFA3Q9BQP9 254 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 SEPT11Q9NVA2 429 aaKnown RBP9.75□□□□□ -0.85
SREK1-215ENST00000524111 ZBTB21Q9ULJ3 1066 aa9.75□□□□□ -0.85
SREK1-215ENST00000524111 CFBP00751 764 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 FXR1P51114 621 aaKnown RBP eCLIP9.74□□□□□ -0.85
SREK1-215ENST00000524111 CYP27A1Q02318 531 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 SHISA4Q96DD7 197 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 TDRD3Q9H7E2 651 aaKnown RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 PCDHAC2Q9Y5I4 1007 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 COL18A1P39060 1754 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 CTAGE9A4FU28 777 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 H0YIN7 160 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 HOXA13P31271 388 aaPredicted RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 CERKLQ49MI3 558 aaPredicted RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 TSG101Q99816 390 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.74□□□□□ -0.856e-7■■■■■ 86.1
SREK1-215ENST00000524111 BARHL2Q9NY43 387 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 MAD2L2Q9UI95 211 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 GOLGA6L9A6NEM1 432 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 TFRCP02786 760 aaKnown RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 TRAPPC10P48553 1259 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 RNASE9P60153 205 aaKnown RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 PPARDQ03181 441 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 TBC1D10BQ4KMP7 808 aaPredicted RBP9.74□□□□□ -0.85
SREK1-215ENST00000524111 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
SREK1-215ENST00000524111 CCDC42Q96M95 316 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms