RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 PLAGL2Q9UPG8 496 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 GPR55Q9Y2T6 319 aaPredicted RBP5.66□□□□□ -1.5
SKP1-212ENST00000523966 PPP1R12AO14974 1030 aaPredicted RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 ASMTLO95671 621 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 GSTM1P09488 218 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 FGFR1P11362 822 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 PABPC1P11940 636 aaKnown RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 NCLP19338 710 aaKnown RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 L1CAMP32004 1257 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 BMP8BP34820 402 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 SUMO1P63165 101 aaKnown RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 IKZF1Q13422 519 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 NLGN1Q8N2Q7 840 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 JMYQ8N9B5 988 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 LINC00116Q8NCU8 138 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 LGR4Q9BXB1 951 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 BSDC1Q9NW68 430 aaPredicted RBP5.65□□□□□ -1.5
SKP1-212ENST00000523966 TCFL5Q9UL49 500 aa5.65□□□□□ -1.5
SKP1-212ENST00000523966 C2orf71A6NGG8 1288 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 ADCY3O60266 1144 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 FKTNO75072 461 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 VAV1P15498 845 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 EGR3Q06889 387 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 FAM209AQ5JX71 171 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 USHBP1Q8N6Y0 703 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 NAT16Q8N8M0 369 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 CDADC1Q9BWV3 514 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 FOXP3Q9BZS1 431 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 NKX2-4Q9H2Z4 354 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 ATP13A1Q9HD20 1204 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 SEMA3GQ9NS98 782 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 SLC5A6Q9Y289 635 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 BACE2Q9Y5Z0 518 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 U3KQE9 123 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 PITPNM2Q9BZ72 1349 aa5.64□□□□□ -1.51
SKP1-212ENST00000523966 DNAJC25-GNG10A0A024R161 153 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 STXBP3O00186 592 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 TBX1O43435 398 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 RPL10P27635 214 aaKnown RBP5.63□□□□□ -1.51
SKP1-212ENST00000523966 HOXA10P31260 410 aaPredicted RBP5.63□□□□□ -1.51
SKP1-212ENST00000523966 CTSKP43235 329 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 SCRN1Q12765 414 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 MAP4K2Q12851 820 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 PLEKHG4Q58EX7 1191 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 RNF187Q5TA31 235 aaPredicted RBP5.63□□□□□ -1.51
SKP1-212ENST00000523966 EGFLAMQ63HQ2 1017 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 EEF1DP3Q658K8 133 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 KANSL2Q9H9L4 492 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
SKP1-212ENST00000523966 MRPS23Q9Y3D9 190 aaKnown RBP5.63□□□□□ -1.51
SKP1-212ENST00000523966 PCDHA11Q9Y5I1 949 aa5.63□□□□□ -1.51
SKP1-212ENST00000523966 TRBV23OR9-2A0A075B6M9 112 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 ANKRD62A6NC57 917 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 WASH4PA8MWX3 477 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 AURKAO14965 403 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 ZNF205O95201 554 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 GRIA2P42262 883 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 GFRA1P56159 465 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 ANGEL2Q5VTE6 544 aaKnown RBP5.62□□□□□ -1.51
SKP1-212ENST00000523966 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
SKP1-212ENST00000523966 IQCEQ6IPM2 695 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 WAPLQ7Z5K2 1190 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 FCRL3Q96P31 734 aaPredicted RBP5.62□□□□□ -1.51
SKP1-212ENST00000523966 FEZ1Q99689 392 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 SLC12A9Q9BXP2 914 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 TMX1Q9H3N1 280 aa5.62□□□□□ -1.51
SKP1-212ENST00000523966 ANGEL1Q9UNK9 670 aaKnown RBP5.62□□□□□ -1.51
SKP1-212ENST00000523966 RBAK-RBAKDNI3L0D1 243 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 MEFVO15553 781 aaPredicted RBP5.61□□□□□ -1.51
SKP1-212ENST00000523966 PAMP19021 973 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
SKP1-212ENST00000523966 BNIP3Q12983 259 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 GAB4Q2WGN9 574 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 RCSD1Q6JBY9 416 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 USP53Q70EK8 1073 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 TMEM145Q8NBT3 493 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 CCDC120Q96HB5 630 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 EXOC2Q96KP1 924 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 LMCD1Q9NZU5 365 aa5.61□□□□□ -1.51
SKP1-212ENST00000523966 SBNO2Q9Y2G9 1366 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 PLD2O14939 933 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 DLX3O60479 287 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 EFCAB14O75071 495 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 SCG5P05408 212 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 IFNGR1P15260 489 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 NAT1P18440 290 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 SSTR4P31391 388 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 GYS2P54840 703 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 GABREP78334 506 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 ZP2Q05996 745 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 DUSP4Q13115 394 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 SF1Q15637 639 aaKnown RBP5.6□□□□□ -1.51
SKP1-212ENST00000523966 FOXB2Q5VYV0 432 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 CYP2R1Q6VVX0 501 aa5.6□□□□□ -1.51
SKP1-212ENST00000523966 VSIG10LQ86VR7 867 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms