RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SLC1A4P43007 532 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 POSTNQ15063 836 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.66
SREK1-212ENST00000522912 DHX58Q96C10 678 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 BPIFA3Q9BQP9 254 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 TMEM39BQ9GZU3 492 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 TMEM260Q9NX78 707 aa19.18■□□□□ 0.66
SREK1-212ENST00000522912 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.18■□□□□ 0.66
SREK1-212ENST00000522912 BECN2A8MW95 431 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 F5H6K3 240 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 ZBTB5O15062 677 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 PTGER2P43116 358 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 KLRC3Q07444 240 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 JAKMIP3Q5VZ66 844 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
SREK1-212ENST00000522912 HOOK1Q9UJC3 728 aaKnown RBP19.17■□□□□ 0.66
SREK1-212ENST00000522912 PSDA5PKW4 1024 aaPredicted RBP19.17■□□□□ 0.66
SREK1-212ENST00000522912 WNT10BO00744 389 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 ADCY7P51828 1080 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 PLA2G4DQ86XP0 818 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 GMCL1P1Q8NEA9 526 aa19.17■□□□□ 0.66
SREK1-212ENST00000522912 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 ZNF75DP51815 510 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 PRELPP51888 382 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 KANK3Q6NY19 840 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 PPP1R18Q6NYC8 613 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 FAM83AQ86UY5 434 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 MYOZ2Q9NPC6 264 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 PGAP2Q9UHJ9 254 aa19.16■□□□□ 0.66
SREK1-212ENST00000522912 NDUFB10O96000 172 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 SARSP49591 514 aaKnown RBP19.15■□□□□ 0.66
SREK1-212ENST00000522912 RASSF7Q02833 373 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 TNIP1Q15025 636 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 NT5DC1Q5TFE4 455 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 TBCKQ8TEA7 893 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 NUP88Q99567 741 aaPredicted RBP19.15■□□□□ 0.66
SREK1-212ENST00000522912 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 BMP6P22004 513 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 LONP1P36776 959 aaKnown RBP19.15■□□□□ 0.66
SREK1-212ENST00000522912 LETM2Q2VYF4 491 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 SARM1Q6SZW1 724 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 SH3RF1Q7Z6J0 888 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 NEK8Q86SG6 692 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 RIC8AQ9NPQ8 531 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 MAN1B1Q9UKM7 699 aa19.15■□□□□ 0.66
SREK1-212ENST00000522912 MYO1BO43795 1136 aa19.14■□□□□ 0.65
SREK1-212ENST00000522912 E2F4Q16254 413 aa19.14■□□□□ 0.65
SREK1-212ENST00000522912 QRICH1Q2TAL8 776 aa19.14■□□□□ 0.65
SREK1-212ENST00000522912 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
SREK1-212ENST00000522912 EDIL3O43854 480 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 TBC1D12O60347 775 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 CCNT1O60563 726 aaKnown RBP19.13■□□□□ 0.65
SREK1-212ENST00000522912 EGFRP00533 1210 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
SREK1-212ENST00000522912 DTHD1Q6ZMT9 781 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 MIGA2Q7L4E1 593 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 SPC24Q8NBT2 197 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 SPATA20Q8TB22 786 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 PAGE5Q96GU1 130 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 ZKSCAN5Q9Y2L8 839 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 LAD1O00515 517 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 CDC25AP30304 524 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 NCAPHQ15003 741 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 UBE2SQ16763 222 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 UPF1Q92900 1129 aaKnown RBP eCLIP19.13■□□□□ 0.65
SREK1-212ENST00000522912 SMARCE1Q969G3 411 aa19.13■□□□□ 0.65
SREK1-212ENST00000522912 PRPHP41219 470 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 ECE1P42892 770 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 AFMP43652 599 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 CLK2P49760 499 aaKnown RBP19.12■□□□□ 0.65
SREK1-212ENST00000522912 CDC37Q16543 378 aaPredicted RBP19.12■□□□□ 0.65
SREK1-212ENST00000522912 ACER1Q8TDN7 264 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 ZBTB21Q9ULJ3 1066 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 SCAF8Q9UPN6 1271 aaKnown RBP19.12■□□□□ 0.65
SREK1-212ENST00000522912 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.12■□□□□ 0.65
SREK1-212ENST00000522912 MYH7BA7E2Y1 1941 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 BMP3P12645 472 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 KIAA1755Q5JYT7 1200 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 SYNPO2Q9UMS6 1093 aa19.12■□□□□ 0.65
SREK1-212ENST00000522912 PP2D1A8MPX8 630 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 RPS12P25398 132 aaKnown RBP19.11■□□□□ 0.65
SREK1-212ENST00000522912 CASP1P29466 404 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 SNAP25P60880 206 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 MORC3Q14149 939 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 PDXDC2PQ6P474 469 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 IQUBQ8NA54 791 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 CUL5Q93034 780 aa19.11■□□□□ 0.65
SREK1-212ENST00000522912 ZNF830Q96NB3 372 aaPredicted RBP19.11■□□□□ 0.65
SREK1-212ENST00000522912 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.11■□□□□ 0.65
SREK1-212ENST00000522912 TMEM232C9JQI7 657 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 IKBKBO14920 756 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 NEMFO60524 1076 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 OR52Z1P0C646 297 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 CLCN1P35523 988 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 GMPSP49915 693 aaPredicted RBP19.1■□□□□ 0.65
SREK1-212ENST00000522912 MAP3K10Q02779 954 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms