RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GALK1P51570 392 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZNF124Q15973 351 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 DIRC2Q96SL1 478 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 KANSL2Q9H9L4 492 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZMYM5Q9UJ78 669 aa7.01□□□□□ -1.29
HMGB1P1-201ENST00000522557 FITM1A5D6W6 292 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 NOTOA8MTQ0 251 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 PSPNO60542 156 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 GJB6O95452 261 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 DUSP4Q13115 394 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 NR0B2Q15466 257 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 PLEKHG4Q58EX7 1191 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 LCE3BQ5TA77 95 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 SPPL2CQ8IUH8 684 aa7□□□□□ -1.29
HMGB1P1-201ENST00000522557 SRPK1Q96SB4 655 aaKnown RBP7□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZNF214Q9UL59 606 aaPredicted RBP7□□□□□ -1.29
HMGB1P1-201ENST00000522557 SBNO2Q9Y2G9 1366 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 PDPK1O15530 556 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 USP2O75604 605 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 EFEMP2O95967 443 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 YBX3P16989 372 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 CRTC3Q6UUV7 619 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 KRTAP1-3Q8IUG1 177 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 LILRA2Q8N149 483 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 ANKS4BQ8N8V4 417 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 KLHL6Q8WZ60 621 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 BRF1Q92994 677 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 FAM84AQ96KN4 292 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 PCDHB10Q9UN67 800 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZNF451Q9Y4E5 1061 aa6.99□□□□□ -1.29
HMGB1P1-201ENST00000522557 B2RBV5 119 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 VAV1P15498 845 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 ZNF445P59923 1031 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 CHRNEQ04844 493 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 FXNQ16595 210 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 ST13P5Q8NFI4 369 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 SMARCC1Q92922 1105 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 SHISA4Q96DD7 197 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 MAP6Q96JE9 813 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 HHIPL1Q96JK4 782 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 GP6Q9HCN6 339 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
HMGB1P1-201ENST00000522557 CD247P20963 164 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 BMP8BP34820 402 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 SQSTM1Q13501 440 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 PPP2R5EQ16537 467 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 GNPTABQ3T906 1256 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 C6orf15Q6UXA7 325 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 DSCC1Q9BVC3 393 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 TMEM260Q9NX78 707 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 PRR13Q9NZ81 148 aa6.97□□□□□ -1.29
HMGB1P1-201ENST00000522557 H0Y8X5 98 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 U2SURPO15042 1029 aaKnown RBP6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 ZNF205O95201 554 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 CAPNS1P04632 268 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC14A2Q15849 920 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 CEP128Q6ZU80 1094 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 KIAA0907Q7Z7F0 614 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 SH3TC2Q8TF17 1288 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 DNAJC7Q99615 494 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 CDADC1Q9BWV3 514 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 DCP1AQ9NPI6 582 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC12A7Q9Y666 1083 aa6.96□□□□□ -1.3
HMGB1P1-201ENST00000522557 CBFA2T2O43439 604 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 GSNP06396 782 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 KIR2DL1P43626 348 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 KIR2DL2P43627 348 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 CEBPAP49715 358 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 KIR3DS1Q14943 382 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 SNX17Q15036 470 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 C2orf27AQ580R0 203 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 SYDE1Q6ZW31 735 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 NLRX1Q86UT6 975 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 TMEM52Q8NDY8 209 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 PHAXQ9H814 394 aaKnown RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 CWC22Q9HCG8 908 aaKnown RBP6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 ST7Q9NRC1 585 aa6.95□□□□□ -1.3
HMGB1P1-201ENST00000522557 FADS2P1A8MWK0 482 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 NRDCO43847 1150 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 ADCY3O60266 1144 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 GSTM1P09488 218 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 RTP1P59025 263 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 LARP1BQ659C4 914 aaKnown RBP6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 ZNF513Q8N8E2 541 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 FBXO15Q8NCQ5 510 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 INTS4Q96HW7 963 aaKnown RBP6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms