RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 DGKHQ86XP1 1220 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 DCAF4Q8WV16 495 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 ESR2Q92731 530 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 GPCPD1Q9NPB8 672 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 CTNNA3Q9UI47 895 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 PFASO15067 1338 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 NEDD4P46934 1319 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 BRCA2P51587 3418 aa11.01□□□□□ -0.65
HDAC3-215ENST00000519474 KDM4AO75164 1064 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 PDHBP11177 359 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 CNTN2Q02246 1040 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 IKQ13123 557 aaPredicted RBP11□□□□□ -0.65
HDAC3-215ENST00000519474 IMMTQ16891 758 aaKnown RBP11□□□□□ -0.65
HDAC3-215ENST00000519474 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 RUFY2Q8WXA3 655 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 FGD4Q96M96 766 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 SENP6Q9GZR1 1112 aaPredicted RBP11□□□□□ -0.65
HDAC3-215ENST00000519474 FBXO40Q9UH90 709 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 NRBP1Q9UHY1 535 aa11□□□□□ -0.65
HDAC3-215ENST00000519474 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
HDAC3-215ENST00000519474 MKI67P46013 3256 aaKnown RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 SGSM2O43147 1006 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ALAS1P13196 640 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 LRRC26Q2I0M4 334 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 TKFCQ3LXA3 575 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 CCDC178Q5BJE1 867 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 MUM1L1Q5H9M0 696 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 SYDE2Q5VT97 1194 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 MSL3Q8N5Y2 521 aaKnown RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ARRDC4Q8NCT1 418 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ZSCAN10Q96SZ4 725 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
HDAC3-215ENST00000519474 FRMPD2Q68DX3 1309 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-215ENST00000519474 ICAM1P05362 532 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 CYP21A2P08686 494 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 NT5C2P49902 561 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 LRRC41Q15345 812 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 CYB5R4Q7L1T6 521 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 SKAP1Q86WV1 359 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 FAM133AQ8N9E0 248 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 KRT23Q9C075 422 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 UBA5Q9GZZ9 404 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 A1CFQ9NQ94 594 aaKnown RBP10.98□□□□□ -0.65
HDAC3-215ENST00000519474 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
HDAC3-215ENST00000519474 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
HDAC3-215ENST00000519474 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 DNM1LO00429 736 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 ACVR2BQ13705 512 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 SEC23AQ15436 765 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 CHRDL2Q6WN34 429 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 C7orf61Q8IZ16 206 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 ENAHQ8N8S7 591 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-215ENST00000519474 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 PURBQ96QR8 312 aaKnown RBP10.97□□□□□ -0.65
HDAC3-215ENST00000519474 KATNBL1Q9H079 304 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 CNNM2Q9H8M5 875 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-215ENST00000519474 FAM184BQ9ULE4 1060 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-215ENST00000519474 TAF6LQ9Y6J9 622 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 SYNGAP1Q96PV0 1343 aa10.97□□□□□ -0.65
HDAC3-215ENST00000519474 RAD50Q92878 1312 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 SLC34A2O95436 690 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 PGK1P00558 417 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 ADCYAP1R1P41586 468 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-215ENST00000519474 BAATQ14032 418 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-215ENST00000519474 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 KLHDC9Q8NEP7 349 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 CLEC4DQ8WXI8 215 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 GDF15Q99988 308 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 ABHD16BQ9H3Z7 469 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 CYP39A1Q9NYL5 469 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 CNPY2Q9Y2B0 182 aa10.96□□□□□ -0.65
HDAC3-215ENST00000519474 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-215ENST00000519474 ASTN1O14525 1302 aa10.95□□□□□ -0.66
HDAC3-215ENST00000519474 E7EWF7 191 aa10.95□□□□□ -0.66
HDAC3-215ENST00000519474 RARBP10826 455 aa10.95□□□□□ -0.66
HDAC3-215ENST00000519474 AKR1A1P14550 325 aa10.95□□□□□ -0.66
HDAC3-215ENST00000519474 SYN1P17600 705 aa10.95□□□□□ -0.66
HDAC3-215ENST00000519474 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-215ENST00000519474 FGD1P98174 961 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms