RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 PLCB2Q00722 1185 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 FMR1Q06787 632 aaKnown RBP eCLIP28.09■■■□□ 2.09
DHFR-203ENST00000505337 PNOCQ13519 176 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 KIF4BQ2VIQ3 1234 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 USP49Q70CQ1 688 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 UBA5Q9GZZ9 404 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 NAT10Q9H0A0 1025 aaKnown RBP28.09■■■□□ 2.09
DHFR-203ENST00000505337 CCDC194A0A1B0GVG4 234 aa28.08■■■□□ 2.09
DHFR-203ENST00000505337 MDM2Q00987 491 aaPredicted RBP28.08■■■□□ 2.09
DHFR-203ENST00000505337 CERKLQ49MI3 558 aaPredicted RBP28.08■■■□□ 2.09
DHFR-203ENST00000505337 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.08■■■□□ 2.09
DHFR-203ENST00000505337 POLR2DO15514 142 aaKnown RBP28.07■■■□□ 2.08
DHFR-203ENST00000505337 ACTN4O43707 911 aaKnown RBP28.07■■■□□ 2.08
DHFR-203ENST00000505337 ZRSR1Q15695 479 aaKnown RBP28.07■■■□□ 2.08
DHFR-203ENST00000505337 NYAP2Q9P242 653 aa28.07■■■□□ 2.08
DHFR-203ENST00000505337 SHROOM1Q2M3G4 852 aaPredicted RBP28.06■■■□□ 2.08
DHFR-203ENST00000505337 GPATCH4Q5T3I0 446 aaKnown RBP28.06■■■□□ 2.08
DHFR-203ENST00000505337 SARM1Q6SZW1 724 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 MKL1Q969V6 931 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 MYOZ2Q9NPC6 264 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 ZKSCAN5Q9Y2L8 839 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 GOLGA6L19H0YKK7 550 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 TRAF5O00463 557 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 PTMAP06454 111 aaKnown RBP28.06■■■□□ 2.08
DHFR-203ENST00000505337 MCM7P33993 719 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 CLCN1P35523 988 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 ARL6IP4Q66PJ3 421 aaKnown RBP28.06■■■□□ 2.08
DHFR-203ENST00000505337 PLA2G4DQ86XP0 818 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 C4orf32Q8N8J7 132 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 TRIM34Q9BYJ4 488 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 CREBZFQ9NS37 354 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 HDAC9Q9UKV0 1011 aa28.06■■■□□ 2.08
DHFR-203ENST00000505337 MYH7BA7E2Y1 1941 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 BIN1O00499 593 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 TMEM179Q6ZVK1 233 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 SYMPKQ92797 1274 aaKnown RBP28.05■■■□□ 2.08
DHFR-203ENST00000505337 GLIS2Q9BZE0 524 aaPredicted RBP28.05■■■□□ 2.08
DHFR-203ENST00000505337 KANSL2Q9H9L4 492 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 C6orf50Q9HD87 102 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 SERTAD1Q9UHV2 236 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 HOOK1Q9UJC3 728 aaKnown RBP28.05■■■□□ 2.08
DHFR-203ENST00000505337 ATAD5Q96QE3 1844 aa28.05■■■□□ 2.08
DHFR-203ENST00000505337 ASTN2O75129 1339 aaPredicted RBP28.04■■■□□ 2.08
DHFR-203ENST00000505337 A0A087X0B3 334 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 GNA11P29992 359 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 KRT25Q7Z3Z0 450 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 AOPEPQ8N6M6 819 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 EPSTI1Q96J88 318 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 VAT1LQ9HCJ6 419 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 GPCPD1Q9NPB8 672 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 TMOD2Q9NZR1 351 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 VWA3AA6NCI4 1184 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 SMCO2A6NFE2 343 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 FOXN1O15353 648 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 POSTNQ15063 836 aa28.04■■■□□ 2.08
DHFR-203ENST00000505337 BECN2A8MW95 431 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 EEF2P13639 858 aaKnown RBP28.03■■■□□ 2.08
DHFR-203ENST00000505337 ZNF75DP51815 510 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 IL17AQ16552 155 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 INF2Q27J81 1249 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 NT5DC1Q5TFE4 455 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 MTMR8Q96EF0 704 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 JMJD4Q9H9V9 463 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 PCDHA5Q9Y5H7 936 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 CNTNAP1P78357 1384 aa28.03■■■□□ 2.08
DHFR-203ENST00000505337 TMEM88BA6NKF7 163 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 ATP2B2Q01814 1243 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 DLGAP5Q15398 846 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 SPDYE2Q495Y8 402 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 KANK3Q6NY19 840 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 PPP1R18Q6NYC8 613 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 ADGRF4Q8IZF3 695 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 PDILTQ8N807 584 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 MTMR14Q8NCE2 650 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 CSRNP1Q96S65 589 aa28.02■■■□□ 2.08
DHFR-203ENST00000505337 ZNF70Q9UC06 446 aaPredicted RBP28.02■■■□□ 2.08
DHFR-203ENST00000505337 SEPT2Q15019 361 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 CCDC96Q2M329 555 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.01■■■□□ 2.07
DHFR-203ENST00000505337 SIAH1Q8IUQ4 282 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 OGFOD1Q8N543 542 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 DCAF4Q8WV16 495 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 HERC5Q9UII4 1024 aaKnown RBP28.01■■■□□ 2.07
DHFR-203ENST00000505337 PRR29P0C7W0 189 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 MSNP26038 577 aaKnown RBP28.01■■■□□ 2.07
DHFR-203ENST00000505337 ICA1Q05084 483 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 ABCB5Q2M3G0 1257 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 CST9Q5W186 159 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 TTBK2Q6IQ55 1244 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 DLK2Q6UY11 383 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 KLRG1Q96E93 195 aa28.01■■■□□ 2.07
DHFR-203ENST00000505337 PNMA6FA0A0J9YX94 578 aa28■■■□□ 2.07
DHFR-203ENST00000505337 NONOQ15233 471 aaKnown RBP eCLIP28■■■□□ 2.07
DHFR-203ENST00000505337 TRIM5Q9C035 493 aa28■■■□□ 2.07
DHFR-203ENST00000505337 GGA3Q9NZ52 723 aa28■■■□□ 2.07
DHFR-203ENST00000505337 CLRN2A0PK11 232 aa27.99■■■□□ 2.07
DHFR-203ENST00000505337 GDF11O95390 407 aa27.99■■■□□ 2.07
DHFR-203ENST00000505337 SARSP49591 514 aaKnown RBP27.99■■■□□ 2.07
DHFR-203ENST00000505337 MMP14P50281 582 aa27.99■■■□□ 2.07
DHFR-203ENST00000505337 NBPF9Q3BBW0 867 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms