RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, human

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRAMP1-208	ENST00000498594	MTMR7	Q9Y216	660 aa		4.23	□□□□□ -1.73
CRAMP1-208	ENST00000498594	UST	Q9Y2C2	406 aa		4.23	□□□□□ -1.73
CRAMP1-208	ENST00000498594	COG6	Q9Y2V7	657 aa		4.23	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MED23	Q9ULK4	1368 aa		4.23	□□□□□ -1.73
CRAMP1-208	ENST00000498594	DDX60L	Q5H9U9	1706 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	BICDL2	A1A5D9	508 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MANSC4	A6NHS7	340 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	DLL1	O00548	723 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TIMM44	O43615	452 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	PPFIA3	O75145	1194 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TAF5L	O75529	589 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	FMNL1	O95466	1100 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	PCCA	P05165	728 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	IGKV5-2	P06315	115 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	IDO1	P14902	403 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ZNF24	P17028	368 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	FECH	P22830	423 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TPP2	P29144	1249 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	STIP1	P31948	543 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SLC8A1	P32418	973 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	GCK	P35557	465 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	KCNJ6	P48051	423 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	GCLC	P48506	637 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	CTSW	P56202	376 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ROR2	Q01974	943 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SP3	Q02447	781 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SCRN1	Q12765	414 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	PRPF4B	Q13523	1007 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	KIAA0753	Q2KHM9	967 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	CCDC57	Q2TAC2	916 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	CWF19L2	Q2TBE0	894 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	KBTBD12	Q3ZCT8	623 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SLC9C1	Q4G0N8	1177 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ANKRD45	Q5TZF3	282 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	CEP135	Q66GS9	1140 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	INTS3	Q68E01	1043 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	C16orf87	Q6PH81	154 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	LRRC31	Q6UY01	552 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	LRRC49	Q8IUZ0	686 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	FAM114A1	Q8IWE2	563 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	REXO1L1P	Q8IX06	675 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	STAG2	Q8N3U4	1231 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	C8orf58	Q8NAV2	365 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TTLL11	Q8NHH1	800 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	EZH1	Q92800	747 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	N4BP2L2	Q92802	583 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ARMC5	Q96C12	935 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	HOOK2	Q96ED9	719 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	THOC1	Q96FV9	657 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	OTUD5	Q96G74	571 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ZNF333	Q96JL9	665 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	PRMT6	Q96LA8	375 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	METTL22	Q9BUU2	404 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MAK16	Q9BXY0	300 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ARHGAP39	Q9C0H5	1083 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ELP3	Q9H9T3	547 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ATP6V0A4	Q9HBG4	840 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ARHGEF10L	Q9HCE6	1279 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	LUC7L	Q9NQ29	371 aa	Known RBP	4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MBIP	Q9NS73	344 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SPATA7	Q9P0W8	599 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MAP3K2	Q9Y2U5	619 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	TMEM98	Q9Y2Y6	226 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	PTCH2	Q9Y6C5	1203 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	DOCK1	Q14185	1865 aa		4.22	□□□□□ -1.73
CRAMP1-208	ENST00000498594	ZNF804B	A4D1E1	1349 aa		4.21	□□□□□ -1.73
CRAMP1-208	ENST00000498594	MUC3A	Q02505	3323 aa		4.21	□□□□□ -1.73
CRAMP1-208	ENST00000498594	SMCHD1	A6NHR9	2005 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ERICH2	A1L162	156 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ENO4	A6NNW6	628 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	PPP1R12B	O60237	982 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CEP104	O60308	925 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ADCY5	O95622	1261 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ECEL1	O95672	775 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CAVIN2	O95810	425 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ALDH1A1	P00352	501 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CCDC159	P0C7I6	412 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ZBTB48	P10074	688 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	EZR	P15311	586 aa	Known RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	FER	P16591	822 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	SSTR3	P32745	418 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CCNH	P51946	323 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	SH3BGR	P55822	239 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	FOXD4	Q12950	439 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	DRP2	Q13474	957 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	SMC1A	Q14683	1233 aa	Known RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	MTFR1	Q15390	333 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	DLGAP5	Q15398	846 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CLPP	Q16740	277 aa	Predicted RBP	4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	TUSC1	Q2TAM9	212 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CFAP100	Q494V2	611 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CCDC158	Q5M9N0	1113 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	NUGGC	Q68CJ6	796 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	NYAP1	Q6ZVC0	841 aa		4.21	□□□□□ -1.74
CRAMP1-208	ENST00000498594	G2E3	Q7L622	706 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms