RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 PCDHGB7Q9Y5F8 929 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 IRAK3Q9Y616 596 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 IRS4O14654 1257 aaPredicted RBP6.11□□□□□ -1.43
CBX3-208ENST00000497498 PRKCAP17252 672 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 ZNF445P59923 1031 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 RACK1P63244 317 aaKnown RBP6.11□□□□□ -1.43
CBX3-208ENST00000497498 CBX2Q14781 532 aaPredicted RBP6.11□□□□□ -1.43
CBX3-208ENST00000497498 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
CBX3-208ENST00000497498 FERD3LQ96RJ6 166 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 DSCC1Q9BVC3 393 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 TNFRSF12AQ9NP84 129 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 PARD6AQ9NPB6 346 aa6.11□□□□□ -1.43
CBX3-208ENST00000497498 DDX41Q9UJV9 622 aaKnown RBP6.11□□□□□ -1.43
CBX3-208ENST00000497498 PI3P19957 117 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 HOXA5P20719 270 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 GUCY2CP25092 1073 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 CYP4F8P98187 520 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 TMEM62Q0P6H9 643 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 ZYXQ15942 572 aaKnown RBP6.1□□□□□ -1.43
CBX3-208ENST00000497498 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 CWF19L1Q69YN2 538 aaKnown RBP6.1□□□□□ -1.43
CBX3-208ENST00000497498 UNC5AQ6ZN44 842 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 RNF34Q969K3 372 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
CBX3-208ENST00000497498 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 KCNC2Q96PR1 638 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 JMJD8Q96S16 334 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 GP6Q9HCN6 339 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
CBX3-208ENST00000497498 PPT2Q9UMR5 302 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 FHOD1Q9Y613 1164 aa6.1□□□□□ -1.43
CBX3-208ENST00000497498 NCANO14594 1321 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 H0Y8X5 98 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 PRRG2O14669 202 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 BMP7P18075 431 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 CD247P20963 164 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 VAMP1P23763 118 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 CDR1P51861 262 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 CTSWP56202 376 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 COL9A2Q14055 689 aaPredicted RBP6.09□□□□□ -1.43
CBX3-208ENST00000497498 NOL9Q5SY16 702 aaKnown RBP6.09□□□□□ -1.43
CBX3-208ENST00000497498 TDRD10Q5VZ19 366 aaKnown RBP6.09□□□□□ -1.43
CBX3-208ENST00000497498 HLA-DQA1Q5Y7H0 255 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 RUFY4Q6ZNE9 571 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 MARCH10Q8NA82 808 aaPredicted RBP6.09□□□□□ -1.43
CBX3-208ENST00000497498 NUP43Q8NFH3 380 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 MZB1Q8WU39 189 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
CBX3-208ENST00000497498 ZNF214Q9UL59 606 aaPredicted RBP6.09□□□□□ -1.43
CBX3-208ENST00000497498 ADAMTS20P59510 1910 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 FGF10O15520 208 aaPredicted RBP6.08□□□□□ -1.44
CBX3-208ENST00000497498 TRIM13O60858 407 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 GSTM1P09488 218 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 MVKQ03426 396 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 RAB3GAP1Q15042 981 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 LDHDQ86WU2 507 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 LSRQ86X29 649 aaPredicted RBP6.08□□□□□ -1.44
CBX3-208ENST00000497498 IGDCC3Q8IVU1 814 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 TMEFF1Q8IYR6 380 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 BRF1Q92994 677 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 ZNF451Q9Y4E5 1061 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 PCDHA5Q9Y5H7 936 aa6.08□□□□□ -1.44
CBX3-208ENST00000497498 A0A087WZG4 1122 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 TP53P04637 393 aaPredicted RBP6.07□□□□□ -1.44
CBX3-208ENST00000497498 NOP2P46087 812 aaKnown RBP6.07□□□□□ -1.44
CBX3-208ENST00000497498 FBXW10Q5XX13 1052 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 CYP2R1Q6VVX0 501 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 RPTNQ6XPR3 784 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 TMC6Q7Z403 805 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 FIBCD1Q8N539 461 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 FCRL3Q96P31 734 aaPredicted RBP6.07□□□□□ -1.44
CBX3-208ENST00000497498 ZCCHC4Q9H5U6 513 aa6.07□□□□□ -1.44
CBX3-208ENST00000497498 LTBP3Q9NS15 1303 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 IRS2Q9Y4H2 1338 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 B8ZZF3 427 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 SCAMP3O14828 347 aaKnown RBP6.06□□□□□ -1.44
CBX3-208ENST00000497498 CBFA2T2O43439 604 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 RECKO95980 971 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 ITGA4P13612 1032 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 SOX9P48436 509 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 MAPKAPK2P49137 400 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 AFF3P51826 1226 aaKnown RBP6.06□□□□□ -1.44
CBX3-208ENST00000497498 MFAP1P55081 439 aaKnown RBP6.06□□□□□ -1.44
CBX3-208ENST00000497498 NR1I3Q14994 352 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 FAM129CQ86XR2 697 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 ZNF654Q8IZM8 581 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 NAT16Q8N8M0 369 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 SPATA32Q96LK8 384 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
CBX3-208ENST00000497498 SF3B6Q9Y3B4 125 aaKnown RBP6.06□□□□□ -1.44
CBX3-208ENST00000497498 A0A0G2JLL6 359 aaPredicted RBP6.05□□□□□ -1.44
CBX3-208ENST00000497498 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 PAK2Q13177 524 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 PLEKHN1Q494U1 663 aaPredicted RBP6.05□□□□□ -1.44
CBX3-208ENST00000497498 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms