RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 NEFLP07196 543 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 IKQ13123 557 aaPredicted RBP25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 SYDE2Q5VT97 1194 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 PNMA1Q8ND90 353 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 CHST13Q8NET6 341 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 GPCPD1Q9NPB8 672 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 LRRC37A2A6NM11 1700 aa25.93■■□□□ 1.74
PCOLCE-210ENST00000496269 FARP2O94887 1054 aaPredicted RBP25.92■■□□□ 1.74
PCOLCE-210ENST00000496269 SLC5A4Q9NY91 659 aa25.92■■□□□ 1.74
PCOLCE-210ENST00000496269 TFRCP02786 760 aaKnown RBP25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 TAL1P17542 331 aaPredicted RBP25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 ANTXR2P58335 489 aa25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 MB21D2Q8IYB1 491 aaPredicted RBP25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 FBXO40Q9UH90 709 aa25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 CTDP1Q9Y5B0 961 aaPredicted RBP25.91■■□□□ 1.74
PCOLCE-210ENST00000496269 COL9A3Q14050 684 aaPredicted RBP25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 NECTIN1Q15223 517 aa25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 TKFCQ3LXA3 575 aa25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 CCDC174Q6PII3 467 aa25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 ANKLE1Q8NAG6 615 aa25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 DIS3LQ8TF46 1054 aaKnown RBP25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 KAT14Q9H8E8 782 aa25.9■■□□□ 1.74
PCOLCE-210ENST00000496269 ICAM1P05362 532 aa25.89■■□□□ 1.74
PCOLCE-210ENST00000496269 SLC4A3P48751 1232 aa25.89■■□□□ 1.74
PCOLCE-210ENST00000496269 GPATCH4Q5T3I0 446 aaKnown RBP25.89■■□□□ 1.74
PCOLCE-210ENST00000496269 UBAC1Q9BSL1 405 aa25.89■■□□□ 1.74
PCOLCE-210ENST00000496269 RNF146Q9NTX7 359 aa25.89■■□□□ 1.74
PCOLCE-210ENST00000496269 CDC45O75419 566 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 GOLGA8HP0CJ92 632 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 MUM1L1Q5H9M0 696 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 ERICH6BQ5W0A0 696 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 TINF2Q9BSI4 451 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 CPVLQ9H3G5 476 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 ACAD9Q9H845 621 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 SENP2Q9HC62 589 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 A1CFQ9NQ94 594 aaKnown RBP25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 HOMER2Q9NSB8 354 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 DDX20Q9UHI6 824 aaKnown RBP25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 MYH6P13533 1939 aa25.88■■□□□ 1.73
PCOLCE-210ENST00000496269 SLC27A2O14975 620 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 TRDNQ13061 729 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 PRAMEF19Q5SWL8 479 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 MAMDC4Q6UXC1 1216 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 KIAA1211Q6ZU35 1233 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 NCOA7Q8NI08 942 aa25.87■■□□□ 1.73
PCOLCE-210ENST00000496269 IFIT1BQ5T764 474 aaKnown RBP25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 ZNF467Q7Z7K2 595 aaPredicted RBP25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 FAM133AQ8N9E0 248 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 DDX11Q96FC9 970 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 PAWRQ96IZ0 340 aaKnown RBP25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 TRERF1Q96PN7 1200 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 ANO2Q9NQ90 1003 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 NRBP1Q9UHY1 535 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 CCPG1Q9ULG6 757 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 ASTN1O14525 1302 aa25.86■■□□□ 1.73
PCOLCE-210ENST00000496269 ALAS1P13196 640 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 ASPRV1Q53RT3 343 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 CREB3L3Q68CJ9 461 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 ANKRD35Q8N283 1001 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 MSL3Q8N5Y2 521 aaKnown RBP25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 UBA5Q9GZZ9 404 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 WDR19Q8NEZ3 1342 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 SYNGAP1Q96PV0 1343 aa25.85■■□□□ 1.73
PCOLCE-210ENST00000496269 SEPT4O43236 478 aa25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 SNAI1O95863 264 aaPredicted RBP25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 ZNF865P0CJ78 1059 aaPredicted RBP25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 COL6A1P12109 1028 aa25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 CNTN2Q02246 1040 aa25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 PRPF38BQ5VTL8 546 aaKnown RBP25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 CHST3Q7LGC8 479 aa25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 RALYLQ86SE5 291 aaKnown RBP25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 IGDCC4Q8TDY8 1250 aa25.84■■□□□ 1.73
PCOLCE-210ENST00000496269 MSCO60682 206 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 SLC35G1Q2M3R5 365 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 STAG2Q8N3U4 1231 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 CLEC4DQ8WXI8 215 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 CYP39A1Q9NYL5 469 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 PFASO15067 1338 aa25.83■■□□□ 1.73
PCOLCE-210ENST00000496269 SOWAHBA6NEL2 793 aa25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 IFIT3O14879 490 aaKnown RBP25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 CNGA1P29973 690 aa25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 ADGRF4Q8IZF3 695 aa25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 KATNBL1Q9H079 304 aa25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 MAD2L2Q9UI95 211 aa25.82■■□□□ 1.72
PCOLCE-210ENST00000496269 CEP290O15078 2479 aa25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 PALM3A6NDB9 673 aaPredicted RBP25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 NFIBO00712 420 aa25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 PARP1P09874 1014 aaKnown RBP25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 TROAPQ12815 778 aa25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 NECAB2Q7Z6G3 386 aa25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 GPHNQ9NQX3 736 aaPredicted RBP25.81■■□□□ 1.72
PCOLCE-210ENST00000496269 GRM4Q14833 912 aa25.8■■□□□ 1.72
PCOLCE-210ENST00000496269 CDC37Q16543 378 aaPredicted RBP25.8■■□□□ 1.72
PCOLCE-210ENST00000496269 MTA3Q9BTC8 594 aa25.8■■□□□ 1.72
PCOLCE-210ENST00000496269 LY9Q9HBG7 655 aa25.8■■□□□ 1.72
PCOLCE-210ENST00000496269 POTEB2H3BUK9 544 aa25.79■■□□□ 1.72
PCOLCE-210ENST00000496269 WTAPQ15007 396 aa25.79■■□□□ 1.72
PCOLCE-210ENST00000496269 ANO1Q5XXA6 986 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms