RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 IDI2Q9BXS1 227 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 YBX3P16989 372 aaKnown RBP eCLIP10.69□□□□□ -0.76e-10■□□□□ 10.4
GAPVD1-219ENST00000495955 MIER3Q7Z3K6 550 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 DHX37Q8IY37 1157 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 STAG2Q8N3U4 1231 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 CTAGE5O15320 804 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 ATL3Q6DD88 541 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 MMP19Q99542 508 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 MRIQ9BWK5 157 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 EHD4Q9H223 541 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 ANAPC4Q9UJX5 808 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 MRVI1Q9Y6F6 885 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 SYCE3A1L190 88 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 IPO7O95373 1038 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 SNX29Q8TEQ0 813 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 GINS2Q9Y248 185 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 GAKO14976 1311 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 HOXD10P28358 340 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 UTP14CQ5TAP6 766 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 TNPO2O14787 897 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 NCBP1Q09161 790 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 TAF1DQ9H5J8 278 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 FAM198AQ9UFP1 575 aa10.68□□□□□ -0.7
GAPVD1-219ENST00000495955 CD2BP2O95400 341 aaKnown RBP10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 FCER1AP12319 257 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 PTGER2P43116 358 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 GSE1Q14687 1217 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 QRICH1Q2TAL8 776 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ACER1Q8TDN7 264 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 FKBP1CQ5VVH2 108 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 MAEAQ7L5Y9 396 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 AIFM3Q96NN9 605 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 FBXO18Q8NFZ0 1043 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TCHPQ9BT92 498 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TEKT3Q9BXF9 490 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TRPC6Q9Y210 931 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 IQUBQ8NA54 791 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 TBCKQ8TEA7 893 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ACAD9Q9H845 621 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 RMND1Q9NWS8 449 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ARFGEF2Q9Y6D5 1785 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ABCB11O95342 1321 aa10.67□□□□□ -0.7
GAPVD1-219ENST00000495955 ARHGEF35A5YM69 484 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 FDX1P10109 184 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 CDC27P30260 824 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 TECP42680 631 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 ZNF543Q08ER8 600 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 SLFN12Q8IYM2 578 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 TRAF5O00463 557 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 MKRN1Q9UHC7 482 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 SMTNL1A8MU46 457 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 RHBDL3P58872 404 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 A0A1B0GVL5 298 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 BACE1P56817 501 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 TAF6LQ9Y6J9 622 aa10.66□□□□□ -0.7
GAPVD1-219ENST00000495955 FZD9O00144 591 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 MMP1P03956 469 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 EXOSC10Q01780 885 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 SYCP1Q15431 976 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 DNM3Q9UQ16 869 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 PDHBP11177 359 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 SHMT1P34896 483 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 NR5A1Q13285 461 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 USP17L6PQ6QN14 398 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 OR52Z1P0C646 297 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 COPB2P35606 906 aa10.65□□□□□ -0.7
GAPVD1-219ENST00000495955 RCAN1P53805 252 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms