RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 ACVR2BQ13705 512 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 ZMYM1Q5SVZ6 1142 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 TSHZ3Q63HK5 1081 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 STAG1Q8WVM7 1258 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 GMCL1Q96IK5 515 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 RNPC3Q96LT9 517 aaKnown RBP9.15□□□□□ -0.94
PTPRK-214ENST00000495748 RAVER2Q9HCJ3 691 aaKnown RBP9.15□□□□□ -0.94
PTPRK-214ENST00000495748 EPB41L4AQ9HCS5 686 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-214ENST00000495748 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-214ENST00000495748 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
PTPRK-214ENST00000495748 LAMA3Q16787 3333 aa9.15□□□□□ -0.95
PTPRK-214ENST00000495748 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.95
PTPRK-214ENST00000495748 SYNRGQ9UMZ2 1314 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 GREB1LQ9C091 1923 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 A0A0U1RQG5 324 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 TRIM43BA6NCK2 446 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 ZEB2O60315 1214 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 CABYRO75952 493 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 GJA9P57773 515 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 KCNA10Q16322 511 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 CCDC144BQ3MJ40 725 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 RCSD1Q6JBY9 416 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 ARMCX2Q7L311 632 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 LRRC47Q8N1G4 583 aaKnown RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 KLHDC9Q8NEP7 349 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 TRIM43Q96BQ3 446 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-214ENST00000495748 EVI5LQ96CN4 794 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 STX8Q9UNK0 236 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 PLXNA1Q9UIW2 1896 aa9.14□□□□□ -0.95
PTPRK-214ENST00000495748 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-214ENST00000495748 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-214ENST00000495748 RANBP6O60518 1105 aaKnown RBP9.13□□□□□ -0.95
PTPRK-214ENST00000495748 MCCP23508 829 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.954e-12■□□□□ 8.6
PTPRK-214ENST00000495748 GNASQ5JWF2 1037 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 CCDC129Q6ZRS4 1044 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 TMEM199Q8N511 208 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 GUCD1Q96NT3 240 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
PTPRK-214ENST00000495748 AP5M1Q9H0R1 490 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 UPF3AQ9H1J1 476 aaKnown RBP9.13□□□□□ -0.95
PTPRK-214ENST00000495748 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 HELLSQ9NRZ9 838 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 HOMER2Q9NSB8 354 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 RNF146Q9NTX7 359 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 MYH4Q9Y623 1939 aa9.13□□□□□ -0.95
PTPRK-214ENST00000495748 LOC102724159A0A0B4J2E5 919 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ARVCFO00192 962 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 TIMP1P01033 207 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ASGR1P07306 291 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ALAS1P13196 640 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 TNFAIP2Q03169 654 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 AAMPQ13685 434 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 PWP2Q15269 919 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ALX1Q15699 326 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 IQSEC1Q6DN90 963 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 CCSAPQ6IQ19 270 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 MFSD5Q6N075 450 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 CCDC144CPQ8IYA2 1237 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 FAM133AQ8N9E0 248 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 DCAF4Q8WV16 495 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 FAM161BQ96MY7 647 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 SEC62Q99442 399 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 CDX2Q99626 313 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 TOMM22Q9NS69 142 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ADD3Q9UEY8 706 aaKnown RBP9.12□□□□□ -0.95
PTPRK-214ENST00000495748 ANAPC4Q9UJX5 808 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 Q9Y3F1 56 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 COL6A3P12111 3177 aa9.12□□□□□ -0.95
PTPRK-214ENST00000495748 B4DLN1 442 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 ORC4O43929 436 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 NT5C2P49902 561 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 CDK7P50613 346 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 MRPL12P52815 198 aaKnown RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 NKX3-2P78367 333 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 CCDC96Q2M329 555 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 BRDTQ58F21 947 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 ANKRD45Q5TZF3 282 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 PSRC1Q6PGN9 363 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 MAFAQ8NHW3 353 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 VTA1Q9NP79 307 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms