RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MTRQ99707 1265 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 L2HGDHQ9H9P8 463 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
CHTOP-206ENST00000495554 LAD1O00515 517 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 PARP1P09874 1014 aaKnown RBP16.71■□□□□ 0.27
CHTOP-206ENST00000495554 RXRBP28702 533 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 PICALMQ13492 652 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
CHTOP-206ENST00000495554 CLSTN1O94985 981 aa16.71■□□□□ 0.26
CHTOP-206ENST00000495554 SLU7O95391 586 aaKnown RBP16.71■□□□□ 0.26
CHTOP-206ENST00000495554 SCNN1DP51172 638 aa16.71■□□□□ 0.26
CHTOP-206ENST00000495554 ZMYND12Q9H0C1 365 aa16.71■□□□□ 0.26
CHTOP-206ENST00000495554 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 INF2Q27J81 1249 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
CHTOP-206ENST00000495554 REXO1L1PQ8IX06 675 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 DISC1Q9NRI5 854 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
CHTOP-206ENST00000495554 PHLPP2Q6ZVD8 1323 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 STAT6P42226 847 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
CHTOP-206ENST00000495554 FILIP1LQ4L180 1135 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 RWDD2AQ9UIY3 292 aa16.7■□□□□ 0.26
CHTOP-206ENST00000495554 QSER1Q2KHR3 1735 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 PRPHP41219 470 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 ZNF658Q5TYW1 1059 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 RRAGBQ5VZM2 374 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 C2CD5Q86YS7 1000 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 ARID3AQ99856 593 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 CTNND2Q9UQB3 1225 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 PPP2R2CQ9Y2T4 447 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 RPN1P04843 607 aaKnown RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 GNA11P29992 359 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 CDC25AP30304 524 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 NAPAP54920 295 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 NAA30Q147X3 362 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 KARSQ15046 597 aaKnown RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 PODNQ7Z5L7 613 aa16.69■□□□□ 0.26
CHTOP-206ENST00000495554 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
CHTOP-206ENST00000495554 GOLGB1Q14789 3259 aaKnown RBP16.68■□□□□ 0.26
CHTOP-206ENST00000495554 AKR1B15C9JRZ8 316 aaPredicted RBP16.68■□□□□ 0.26
CHTOP-206ENST00000495554 TEX33O43247 280 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 MYL1P05976 194 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 UBA7P41226 1012 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
CHTOP-206ENST00000495554 TRIM65Q6PJ69 517 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 PANX2Q96RD6 677 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 TMEM60Q9H2L4 133 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 C6orf50Q9HD87 102 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 PBX1P40424 430 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 PAK1Q13153 545 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 MTMR4Q9NYA4 1195 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
CHTOP-206ENST00000495554 DNAI1Q9UI46 699 aa16.68■□□□□ 0.26
CHTOP-206ENST00000495554 IGKV6D-41A0A0C4DH26 115 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 AKR1B1P15121 316 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 SPAG1Q07617 926 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 PPFIBP1Q86W92 1011 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 RASSF8Q8NHQ8 419 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 PLCD4Q9BRC7 762 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 NFIAQ12857 509 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 NAALADL2Q58DX5 795 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 SLX4Q8IY92 1834 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 ADAMTSL1Q8N6G6 1762 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 PLIN4Q96Q06 1357 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 TMX4Q9H1E5 349 aaPredicted RBP16.67■□□□□ 0.26
CHTOP-206ENST00000495554 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
CHTOP-206ENST00000495554 TNS1Q9HBL0 1735 aaKnown RBP16.66■□□□□ 0.26
CHTOP-206ENST00000495554 SMCO2A6NFE2 343 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 H0YIN7 160 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 CHRNA5P30532 468 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 NONOQ15233 471 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHTOP-206ENST00000495554 ZFPM1Q8IX07 1006 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 AK8Q96MA6 479 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 NAA15Q9BXJ9 866 aaKnown RBP16.66■□□□□ 0.26
CHTOP-206ENST00000495554 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
CHTOP-206ENST00000495554 G3V3G9 751 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 DCAF8Q5TAQ9 597 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms