RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PITPNM2Q9BZ72 1349 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 TRBV23-1A0A0A0MS06 115 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 ADCY3O60266 1144 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 ASMTLO95671 621 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 IFNGR1P15260 489 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 VAV1P15498 845 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 HOXC12P31275 282 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 CD96P40200 585 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 SEPHS1P49903 392 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 PRKCQQ04759 706 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 SCRN1Q12765 414 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 SQSTM1Q13501 440 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 TMPRSS7Q7RTY8 843 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 WAPLQ7Z5K2 1190 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 KSR1Q8IVT5 923 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 USHBP1Q8N6Y0 703 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 KCTD13Q8WZ19 329 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 MISP3Q96FF7 219 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
CLK1-213ENST00000492793 BSDC1Q9NW68 430 aaPredicted RBP5.76□□□□□ -1.49
CLK1-213ENST00000492793 VAV3Q9UKW4 847 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 SLC5A6Q9Y289 635 aa5.76□□□□□ -1.49
CLK1-213ENST00000492793 C2orf71A6NGG8 1288 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 PABPC1P11940 636 aaKnown RBP5.75□□□□□ -1.49
CLK1-213ENST00000492793 HSD3B2P26439 372 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 BMP8BP34820 402 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 SF1Q15637 639 aaKnown RBP5.75□□□□□ -1.49
CLK1-213ENST00000492793 PRSS53Q2L4Q9 553 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 TMEM67Q5HYA8 995 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 FOXB2Q5VYV0 432 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 USP53Q70EK8 1073 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 SCUBE1Q8IWY4 988 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 STK11IPQ8N1F8 1099 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 FCRL3Q96P31 734 aaPredicted RBP5.75□□□□□ -1.49
CLK1-213ENST00000492793 DHRS4Q9BTZ2 278 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 NKX2-4Q9H2Z4 354 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 CARS2Q9HA77 564 aaKnown RBP5.75□□□□□ -1.49
CLK1-213ENST00000492793 CYP26B1Q9NR63 512 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 AP5S1Q9NUS5 200 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 RNF112Q9ULX5 631 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 ANGEL1Q9UNK9 670 aaKnown RBP5.75□□□□□ -1.49
CLK1-213ENST00000492793 BACE2Q9Y5Z0 518 aa5.75□□□□□ -1.49
CLK1-213ENST00000492793 CPP00450 1065 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 FGFR1P11362 822 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 ZP2Q05996 745 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 C21orf62-AS1Q17RA5 79 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 LONRF2Q1L5Z9 754 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 MSMPQ1L6U9 139 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 TAF7LQ5H9L4 462 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 ZC3H12BQ5HYM0 836 aaKnown RBP5.74□□□□□ -1.49
CLK1-213ENST00000492793 ANGEL2Q5VTE6 544 aaKnown RBP5.74□□□□□ -1.49
CLK1-213ENST00000492793 RNF111Q6ZNA4 994 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 LINC00116Q8NCU8 138 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 CCDC140Q96MF4 163 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 MCMBPQ9BTE3 642 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 SLC12A9Q9BXP2 914 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 TMEM260Q9NX78 707 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 MRPS23Q9Y3D9 190 aaKnown RBP5.74□□□□□ -1.49
CLK1-213ENST00000492793 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
CLK1-213ENST00000492793 BLACEA4D250 179 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 ENPP3O14638 875 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 AURKAO14965 403 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
CLK1-213ENST00000492793 ZNF205O95201 554 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 ESR1P03372 595 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 THBDP07204 575 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 CD8BP10966 210 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 GFRA1P56159 465 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
CLK1-213ENST00000492793 TCEA2Q15560 299 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 GAB4Q2WGN9 574 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 ZPBP2Q6X784 338 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 ZNF574Q6ZN55 896 aaPredicted RBP5.73□□□□□ -1.49
CLK1-213ENST00000492793 C16orf86Q6ZW13 317 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 TMEM145Q8NBT3 493 aa5.73□□□□□ -1.49
CLK1-213ENST00000492793 BCL7CQ8WUZ0 217 aaPredicted RBP5.73□□□□□ -1.49
CLK1-213ENST00000492793 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLK1-213ENST00000492793 CCDC163A0A0D9SF12 145 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 DLX3O60479 287 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 APPP05067 770 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 ENDOUP21128 410 aaKnown RBP5.72□□□□□ -1.49
CLK1-213ENST00000492793 CANXP27824 592 aaKnown RBP5.72□□□□□ -1.49
CLK1-213ENST00000492793 LAPTM5Q13571 262 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 PPIL6Q8IXY8 311 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 OSBP2Q969R2 916 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 PCMTD2Q9NV79 361 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 SLAMF8Q9P0V8 285 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 CLEC1BQ9P126 229 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 NDOR1Q9UHB4 597 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 CD2APQ9Y5K6 639 aa5.72□□□□□ -1.49
CLK1-213ENST00000492793 NPHP3-ACAD11A0A0J9YXS1 232 aa5.71□□□□□ -1.5
CLK1-213ENST00000492793 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
CLK1-213ENST00000492793 RAPGEF3O95398 923 aa5.71□□□□□ -1.5
CLK1-213ENST00000492793 MED26O95402 600 aa5.71□□□□□ -1.5
CLK1-213ENST00000492793 TBC1D8O95759 1140 aa5.71□□□□□ -1.5
CLK1-213ENST00000492793 PLS3P13797 630 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms