RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 USP17L19D6RCP7 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L20D6RJB6 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 RNF113AO15541 343 aaKnown RBP8.8□□□□□ -1
PRPF4B-208ENST00000490653 KDM4AO75164 1064 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L24Q0WX57 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -1
PRPF4B-208ENST00000490653 IRF5Q13568 498 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 CCL14Q16627 93 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 LCE2CQ5TA81 110 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 ANKRD45Q5TZF3 282 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 CERS3Q8IU89 383 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 KBTBD3Q8NAB2 608 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 COA7Q96BR5 231 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 C12orf42Q96LP6 360 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 FEZ1Q99689 392 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.8□□□□□ -1
PRPF4B-208ENST00000490653 KIAA1683Q9H0B3 1180 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 SENP2Q9HC62 589 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 ATP8A2Q9NTI2 1148 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 NAV1Q8NEY1 1877 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 ALPK3Q96L96 1907 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 DDX60LQ5H9U9 1706 aaKnown RBP8.8□□□□□ -1
PRPF4B-208ENST00000490653 MINDY4BA8MYZ0 360 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 IGHDP01880 384 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 VCAM1P19320 739 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 ERVK-9P63128 1117 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 ERVK-24P63145 666 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 UBXN2AP68543 259 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 TMED8Q6PL24 325 aaPredicted RBP8.79□□□□□ -1
PRPF4B-208ENST00000490653 CCDC129Q6ZRS4 1044 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 SLC17A8Q8NDX2 589 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 GPRC5AQ8NFJ5 357 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 USP6NLQ92738 828 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 HPS1Q92902 700 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 PAWRQ96IZ0 340 aaKnown RBP8.79□□□□□ -1
PRPF4B-208ENST00000490653 DEFB118Q96PH6 123 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
PRPF4B-208ENST00000490653 RPAP3Q9H6T3 665 aaPredicted RBP8.79□□□□□ -1
PRPF4B-208ENST00000490653 EPB41L4AQ9HCS5 686 aaPredicted RBP8.79□□□□□ -1
PRPF4B-208ENST00000490653 INCENPQ9NQS7 918 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 TACC3Q9Y6A5 838 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 MYH7P12883 1935 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 LAMA2P24043 3122 aaKnown RBP8.79□□□□□ -1
PRPF4B-208ENST00000490653 SALL3Q9BXA9 1300 aa8.79□□□□□ -1
PRPF4B-208ENST00000490653 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
PRPF4B-208ENST00000490653 GPAA1O43292 621 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 EEF2P13639 858 aaKnown RBP8.78□□□□□ -1
PRPF4B-208ENST00000490653 WNT7BP56706 349 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 USP46P62068 366 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 SKOR1P84550 965 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 MAP2K5Q13163 448 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 C16orf86Q6ZW13 317 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 GPR142Q7Z601 462 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 SPICE1Q8N0Z3 855 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 TRIB2Q92519 343 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 APPBP2Q92624 585 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 FLRT1Q9NZU1 646 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 PFASO15067 1338 aa8.78□□□□□ -1
PRPF4B-208ENST00000490653 PRDM1O75626 825 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 TFRCP02786 760 aaKnown RBP8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 RASA1P20936 1047 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 USP14P54578 494 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 ATP2B2Q01814 1243 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 TMEM179Q6ZVK1 233 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 PLEKHH3Q7Z736 793 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 IFNL3Q8IZI9 196 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 NPLOC4Q8TAT6 608 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 ATG4CQ96DT6 458 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 SWAP70Q9UH65 585 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 ZMYND8Q9ULU4 1186 aaPredicted RBP8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 TMX2Q9Y320 296 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 RABGAP1Q9Y3P9 1069 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 RLFQ13129 1914 aa8.77□□□□□ -1.01
PRPF4B-208ENST00000490653 CDH23Q9H251 3354 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 PATL2C9JE40 543 aaKnown RBP8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 FOXP2O15409 715 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 SYN1P17600 705 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 MX1P20591 662 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 CCND3P30281 292 aaPredicted RBP8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 BMP8BP34820 402 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 CACNB2Q08289 660 aaPredicted RBP8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 COG2Q14746 738 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 SBK1Q52WX2 424 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 ZMYM1Q5SVZ6 1142 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 WDR78Q5VTH9 848 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 LBX2Q6XYB7 198 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 HLA-CQ95604 372 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 NUP88Q99567 741 aaPredicted RBP8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 HTATIP2Q9BUP3 242 aa8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 MOV10L1Q9BXT6 1211 aaKnown RBP8.76□□□□□ -1.01
PRPF4B-208ENST00000490653 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms