RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 NBPF11Q86T75 865 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 VSIG10LQ86VR7 867 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 ZBTB38Q8NAP3 1195 aaPredicted RBP5.85□□□□□ -1.47
CD46-216ENST00000490278 BTN2A2Q8WVV5 523 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 RNPC3Q96LT9 517 aaKnown RBP5.85□□□□□ -1.47
CD46-216ENST00000490278 FOXP3Q9BZS1 431 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 ARHGEF4Q9NR80 690 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 CCDC39Q9UFE4 941 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 GPR55Q9Y2T6 319 aaPredicted RBP5.85□□□□□ -1.47
CD46-216ENST00000490278 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
CD46-216ENST00000490278 LOC105371045A0A1W2PR82 267 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 ZNF205O95201 554 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 CAPNS1P04632 268 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 CD3EP07766 207 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 FAM153BP0C7A2 387 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 CD8BP10966 210 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 CD96P40200 585 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 DPY19L1Q2PZI1 675 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 ZC3H12BQ5HYM0 836 aaKnown RBP5.84□□□□□ -1.47
CD46-216ENST00000490278 ANGEL2Q5VTE6 544 aaKnown RBP5.84□□□□□ -1.47
CD46-216ENST00000490278 FCRL3Q96P31 734 aaPredicted RBP5.84□□□□□ -1.47
CD46-216ENST00000490278 SLC12A9Q9BXP2 914 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 NKX2-4Q9H2Z4 354 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 LMCD1Q9NZU5 365 aa5.84□□□□□ -1.47
CD46-216ENST00000490278 ANGEL1Q9UNK9 670 aaKnown RBP5.84□□□□□ -1.47
CD46-216ENST00000490278 SHROOM4Q9ULL8 1493 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 AURKAO14965 403 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 SMARCA5O60264 1052 aaPredicted RBP5.83□□□□□ -1.48
CD46-216ENST00000490278 ENDOUP21128 410 aaKnown RBP5.83□□□□□ -1.48
CD46-216ENST00000490278 HOXC12P31275 282 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 GRIA2P42262 883 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 SPRED2Q7Z698 418 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 ZSWIM2Q8NEG5 633 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 CCDC140Q96MF4 163 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 SLC26A8Q96RN1 970 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 MCMBPQ9BTE3 642 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 KANSL2Q9H9L4 492 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 CARS2Q9HA77 564 aaKnown RBP5.83□□□□□ -1.48
CD46-216ENST00000490278 PCMTD2Q9NV79 361 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 PTCH2Q9Y6C5 1203 aa5.83□□□□□ -1.48
CD46-216ENST00000490278 STXBP3O00186 592 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 FKTNO75072 461 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 GSTM1P09488 218 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 FGFR1P11362 822 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 IFNGR1P15260 489 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 RPL10P27635 214 aaKnown RBP5.82□□□□□ -1.48
CD46-216ENST00000490278 TEKQ02763 1124 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 ZP2Q05996 745 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 TMEM67Q5HYA8 995 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 RTP2Q5QGT7 225 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 YOD1Q5VVQ6 348 aaPredicted RBP5.82□□□□□ -1.48
CD46-216ENST00000490278 ZNF574Q6ZN55 896 aaPredicted RBP5.82□□□□□ -1.48
CD46-216ENST00000490278 WFDC3Q8IUB2 231 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 NLGN1Q8N2Q7 840 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 FLCNQ8NFG4 579 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
CD46-216ENST00000490278 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
CD46-216ENST00000490278 CDC6Q99741 560 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 CDADC1Q9BWV3 514 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 BACE2Q9Y5Z0 518 aa5.82□□□□□ -1.48
CD46-216ENST00000490278 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 TMEM82A0PJX8 343 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 C2orf71A6NGG8 1288 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 PRODHO43272 600 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 CPP00450 1065 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SCG5P05408 212 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SNRPB2P08579 225 aaKnown RBP5.81□□□□□ -1.48
CD46-216ENST00000490278 PABPC1P11940 636 aaKnown RBP5.81□□□□□ -1.48
CD46-216ENST00000490278 KCNJ6P48051 423 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 GFRA1P56159 465 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SCRN1Q12765 414 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SQSTM1Q13501 440 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SF1Q15637 639 aaKnown RBP5.81□□□□□ -1.48
CD46-216ENST00000490278 FOXB2Q5VYV0 432 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SDE2Q6IQ49 451 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 RCSD1Q6JBY9 416 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 WAPLQ7Z5K2 1190 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 SCUBE1Q8IWY4 988 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 KCTD13Q8WZ19 329 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 COPS5Q92905 334 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 AP5S1Q9NUS5 200 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 TMEM260Q9NX78 707 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 ZNF281Q9Y2X9 895 aa5.81□□□□□ -1.48
CD46-216ENST00000490278 CCDC163A0A0D9SF12 145 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 ESYT3A0FGR9 886 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 ENPP3O14638 875 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 DLX3O60479 287 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 WNT11O96014 354 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 FUT4P22083 530 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 ECI1P42126 302 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 SEPHS1P49903 392 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 MAP4K2Q12851 820 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 LRP8Q14114 963 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 FAM209AQ5JX71 171 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms