RNA–Protein interactions for RNA: ENST00000490230.1

PBXIP1-204, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 5

Gene PBXIP1, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-204ENST00000490230 CPVLQ9H3G5 476 aa22.4■■□□□ 1.18
PBXIP1-204ENST00000490230 SMCHD1A6NHR9 2005 aa22.4■■□□□ 1.18
PBXIP1-204ENST00000490230 NT5C2P49902 561 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 ZNF792Q3KQV3 632 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 BTNL9Q6UXG8 535 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 RALYLQ86SE5 291 aaKnown RBP22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 ANKS1AQ92625 1134 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 RNF146Q9NTX7 359 aa22.39■■□□□ 1.17
PBXIP1-204ENST00000490230 CDC45O75419 566 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 SNHG28P0DPA3 235 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 IFIT1BQ5T764 474 aaKnown RBP22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 CHST13Q8NET6 341 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 NCOA7Q8NI08 942 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 DIS3LQ8TF46 1054 aaKnown RBP22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 TRERF1Q96PN7 1200 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 UBA5Q9GZZ9 404 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 CCPG1Q9ULG6 757 aa22.38■■□□□ 1.17
PBXIP1-204ENST00000490230 FRMPD3Q5JV73 1810 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 IGHA2P01877 340 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 CYBAP13498 195 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 ANO1Q5XXA6 986 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 CASC1Q6TDU7 716 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 RANBP17Q9H2T7 1088 aaKnown RBP22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 ACAD9Q9H845 621 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 PPP4R2Q9NY27 417 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
PBXIP1-204ENST00000490230 IFIT3O14879 490 aaKnown RBP22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 SLC27A2O14975 620 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 SEC23AQ15436 765 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 MUM1L1Q5H9M0 696 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 LHX8Q68G74 356 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 UBE2Q1Q7Z7E8 422 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 PAWRQ96IZ0 340 aaKnown RBP22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 SENP2Q9HC62 589 aa22.36■■□□□ 1.17
PBXIP1-204ENST00000490230 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
PBXIP1-204ENST00000490230 ICAM1P05362 532 aa22.35■■□□□ 1.17
PBXIP1-204ENST00000490230 TINF2Q9BSI4 451 aa22.35■■□□□ 1.17
PBXIP1-204ENST00000490230 DDX20Q9UHI6 824 aaKnown RBP22.35■■□□□ 1.17
PBXIP1-204ENST00000490230 OGDHLQ9ULD0 1010 aa22.35■■□□□ 1.17
PBXIP1-204ENST00000490230 DNAJC25-GNG10A0A024R161 153 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 PARP1P09874 1014 aaKnown RBP22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 ANTXR2P58335 489 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 TKFCQ3LXA3 575 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 GPATCH4Q5T3I0 446 aaKnown RBP22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 CREB3L3Q68CJ9 461 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 MB21D2Q8IYB1 491 aaPredicted RBP22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 DPF3Q92784 378 aa22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 DIS3Q9Y2L1 958 aaKnown RBP22.34■■□□□ 1.17
PBXIP1-204ENST00000490230 ERICH2A1L162 156 aa22.33■■□□□ 1.17
PBXIP1-204ENST00000490230 NECTIN1Q15223 517 aa22.33■■□□□ 1.17
PBXIP1-204ENST00000490230 NSMFQ6X4W1 530 aa22.33■■□□□ 1.17
PBXIP1-204ENST00000490230 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.17
PBXIP1-204ENST00000490230 A1CFQ9NQ94 594 aaKnown RBP22.33■■□□□ 1.17
PBXIP1-204ENST00000490230 MCM3APO60318 1980 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 DHX16O60231 1041 aaKnown RBP22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 MNX1P50219 401 aaPredicted RBP22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 COL9A3Q14050 684 aaPredicted RBP22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 WTAPQ15007 396 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 ASPRV1Q53RT3 343 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 TMEM67Q5HYA8 995 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 NECAB2Q7Z6G3 386 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 STAG2Q8N3U4 1231 aa22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 GPHNQ9NQX3 736 aaPredicted RBP22.32■■□□□ 1.16
PBXIP1-204ENST00000490230 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 SART3Q15020 963 aaKnown RBP22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 USH1GQ495M9 461 aa22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 ANKLE1Q8NAG6 615 aa22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 FGD4Q96M96 766 aa22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 PURBQ96QR8 312 aaKnown RBP22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 MKI67P46013 3256 aaKnown RBP22.31■■□□□ 1.16
PBXIP1-204ENST00000490230 MYH6P13533 1939 aa22.3■■□□□ 1.16
PBXIP1-204ENST00000490230 NFIBO00712 420 aa22.3■■□□□ 1.16
PBXIP1-204ENST00000490230 SEPT4O43236 478 aa22.3■■□□□ 1.16
PBXIP1-204ENST00000490230 CNPY2Q9Y2B0 182 aa22.3■■□□□ 1.16
PBXIP1-204ENST00000490230 DDX49Q9Y6V7 483 aaKnown RBP22.3■■□□□ 1.16
PBXIP1-204ENST00000490230 SOWAHBA6NEL2 793 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 PRC1O43663 620 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 SNAI1O95863 264 aaPredicted RBP22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 CAPN2P17655 700 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 CDC37Q16543 378 aaPredicted RBP22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 FAM133AQ8N9E0 248 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 IGDCC4Q8TDY8 1250 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 HTATIP2Q9BUP3 242 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 C11orf49Q9H6J7 331 aa22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
PBXIP1-204ENST00000490230 LCTP09848 1927 aa22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 ALPK3Q96L96 1907 aa22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 PTPDC1A2A3K4 754 aa22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 MSCO60682 206 aa22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 ZNF865P0CJ78 1059 aaPredicted RBP22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 BAATQ14032 418 aaPredicted RBP22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 PRPF38BQ5VTL8 546 aaKnown RBP22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
PBXIP1-204ENST00000490230 LENG1Q96BZ8 264 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms