RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 CTU1Q7Z7A3 348 aaKnown RBP18.55■□□□□ 0.56
HDAC7-224ENST00000488927 CPXCR1Q8N123 301 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 SPZ1Q9BXG8 430 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 RAVER2Q9HCJ3 691 aaKnown RBP18.55■□□□□ 0.56
HDAC7-224ENST00000488927 FBXO40Q9UH90 709 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 IVNS1ABPQ9Y6Y0 642 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 NID2Q14112 1375 aa18.55■□□□□ 0.56
HDAC7-224ENST00000488927 STRNO43815 780 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 PEX10O60683 326 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 ERCC3P19447 782 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 RXRAP19793 462 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 PKN2Q16513 984 aaKnown RBP18.54■□□□□ 0.56
HDAC7-224ENST00000488927 CCDC174Q6PII3 467 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 PLEKHH3Q7Z736 793 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 NCAPG2Q86XI2 1143 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 CHST13Q8NET6 341 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 TRIM47Q96LD4 638 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 KIF2CQ99661 725 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 PORCNQ9H237 461 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 JMJD4Q9H9V9 463 aa18.54■□□□□ 0.56
HDAC7-224ENST00000488927 ZNF536O15090 1300 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 PDIA3P30101 505 aaKnown RBP18.53■□□□□ 0.56
HDAC7-224ENST00000488927 AK2P54819 239 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 CDC37Q16543 378 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-224ENST00000488927 WDR78Q5VTH9 848 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 TMTC3Q6ZXV5 915 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 OTOP1Q7RTM1 612 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 GPR142Q7Z601 462 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 ABRAQ8N0Z2 381 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 SOCS4Q8WXH5 440 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 MTMR8Q96EF0 704 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 ARHGAP39Q9C0H5 1083 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 VAT1LQ9HCJ6 419 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 TRIM17Q9Y577 477 aa18.53■□□□□ 0.56
HDAC7-224ENST00000488927 ZBTB5O15062 677 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 CTGFP29279 349 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 RRP36Q96EU6 259 aaKnown RBP18.52■□□□□ 0.56
HDAC7-224ENST00000488927 AGBL1Q96MI9 1066 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
HDAC7-224ENST00000488927 SRRDQ9UH36 339 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
HDAC7-224ENST00000488927 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 CYTH3O43739 400 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 ST18O60284 1047 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 PLEKHA8P1O95397 391 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 FCER1AP12319 257 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 SNAP25P60880 206 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 KCTD2Q14681 263 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 QRICH1Q2TAL8 776 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.51■□□□□ 0.55
HDAC7-224ENST00000488927 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
HDAC7-224ENST00000488927 NUDT12Q9BQG2 462 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 AMNQ9BXJ7 453 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 MAF1Q9H063 256 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 ACAD9Q9H845 621 aa18.51■□□□□ 0.55
HDAC7-224ENST00000488927 PNMA6FA0A0J9YX94 578 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 ALAS1P13196 640 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 PTPREP23469 700 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 SLC4A3P48751 1232 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 GRB14Q14449 540 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 CPLX2Q6PUV4 134 aaKnown RBP18.5■□□□□ 0.55
HDAC7-224ENST00000488927 NBPF11Q86T75 865 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 FBXO11Q86XK2 927 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 TRERF1Q96PN7 1200 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 RNF146Q9NTX7 359 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 SLC5A4Q9NY91 659 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 RBM27Q9P2N5 1060 aaKnown RBP18.5■□□□□ 0.55
HDAC7-224ENST00000488927 RIPK3Q9Y572 518 aa18.5■□□□□ 0.55
HDAC7-224ENST00000488927 ABCB11O95342 1321 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-224ENST00000488927 CDC27P30260 824 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 RGS2P41220 211 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 MORN1Q5T089 497 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 HOMER1Q86YM7 354 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 PIGSQ96S52 555 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 MMP19Q99542 508 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-224ENST00000488927 FAM217BQ9NTX9 383 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-224ENST00000488927 TPCN1Q9ULQ1 816 aa18.49■□□□□ 0.55
HDAC7-224ENST00000488927 COL11A1P12107 1806 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-224ENST00000488927 CASP8AP2Q9UKL3 1982 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 CPLX1O14810 134 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 PFKFB2O60825 505 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
HDAC7-224ENST00000488927 FLT3LGP49771 235 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 CAP1Q01518 475 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 PRKCZQ05513 592 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 MAP2K5Q13163 448 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 IRF5Q13568 498 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 SLC35G1Q2M3R5 365 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 HOMER2Q9NSB8 354 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 GJD2Q9UKL4 321 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
HDAC7-224ENST00000488927 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 440.3 ms