RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MINDY4BA8MYZ0 360 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 F5H6K3 240 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 ATP2A1O14983 1001 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 AKR1A1P14550 325 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 KLRC3Q07444 240 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 FAM109BQ6ICB4 259 aaPredicted RBP10.19□□□□□ -0.78
PRKCB-208ENST00000487674 SNRNP48Q6IEG0 339 aaKnown RBP10.19□□□□□ -0.78
PRKCB-208ENST00000487674 RNF180Q86T96 592 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 PDLIM7Q9NR12 457 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 CNPY2Q9Y2B0 182 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 CUL9Q8IWT3 2517 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 DNAH12Q6ZR08 3092 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 DNAJC25-GNG10A0A024R161 153 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 M0R2C6 588 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 ZNF865P0CJ78 1059 aaPredicted RBP10.18□□□□□ -0.78
PRKCB-208ENST00000487674 TAL1P17542 331 aaPredicted RBP10.18□□□□□ -0.78
PRKCB-208ENST00000487674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRKCB-208ENST00000487674 STK11IPQ8N1F8 1099 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 PRPF38AQ8NAV1 312 aaKnown RBP10.18□□□□□ -0.78
PRKCB-208ENST00000487674 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 CEP95Q96GE4 821 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
PRKCB-208ENST00000487674 SYNRGQ9UMZ2 1314 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 A0A1W2PQ45 241 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-208ENST00000487674 A0A1W2PQY0 241 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 DLL1O00548 723 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 ERC2O15083 957 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 ZBED4O75132 1171 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 PRDM1O75626 825 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 TTLL1O95922 423 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 PGK1P00558 417 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 APPP05067 770 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 OAZ1P54368 228 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 TLE2Q04725 743 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 MAMDC4Q6UXC1 1216 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 IFNL3Q8IZI9 196 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-208ENST00000487674 GMCL1P1Q8NEA9 526 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 BADQ92934 168 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 MKL1Q969V6 931 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 LENG1Q96BZ8 264 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-208ENST00000487674 DDX11Q96FC9 970 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 SLC38A10Q9HBR0 1119 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 MTMR4Q9NYA4 1195 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 FBXO40Q9UH90 709 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 FEM1BQ9UK73 627 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 RIPK3Q9Y572 518 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 CTDP1Q9Y5B0 961 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-208ENST00000487674 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 MCM3APO60318 1980 aa10.17□□□□□ -0.78
PRKCB-208ENST00000487674 TRIM43BA6NCK2 446 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 PATL2C9JE40 543 aaKnown RBP10.16□□□□□ -0.78
PRKCB-208ENST00000487674 SLC3A2P08195 630 aaKnown RBP10.16□□□□□ -0.78
PRKCB-208ENST00000487674 CLTBP09497 229 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 TSPY3P0CV98 308 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 TSPY8P0CW00 308 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 PDE4BQ07343 736 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 SHHQ15465 462 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 ZNF697Q5TEC3 545 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 CPXCR1Q8N123 301 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 LRRC47Q8N1G4 583 aaKnown RBP10.16□□□□□ -0.78
PRKCB-208ENST00000487674 NEDD1Q8NHV4 660 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 TRIM43Q96BQ3 446 aaPredicted RBP10.16□□□□□ -0.78
PRKCB-208ENST00000487674 GUCD1Q96NT3 240 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
PRKCB-208ENST00000487674 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 FAM184BQ9ULE4 1060 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 TACC3Q9Y6A5 838 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 LRRC37A2A6NM11 1700 aa10.16□□□□□ -0.78
PRKCB-208ENST00000487674 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 KIAA0355O15063 1070 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 PQBP1O60828 265 aaKnown RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 SNAI1O95863 264 aaPredicted RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 FDX1P10109 184 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 CST5P28325 142 aaPredicted RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 ACLYP53396 1101 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 SMAD3P84022 425 aaKnown RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 PPARAQ07869 468 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 ZMYM1Q5SVZ6 1142 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 ANKRD33Q7Z3H0 272 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 CHST13Q8NET6 341 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 NUP133Q8WUM0 1156 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 NAPBQ9H115 298 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 RAVER2Q9HCJ3 691 aaKnown RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.78
PRKCB-208ENST00000487674 ZHX1Q9UKY1 873 aaPredicted RBP10.15□□□□□ -0.78
PRKCB-208ENST00000487674 DUSP11O75319 330 aaKnown RBP10.14□□□□□ -0.79
PRKCB-208ENST00000487674 BMP3P12645 472 aa10.14□□□□□ -0.79
PRKCB-208ENST00000487674 RAG1P15918 1043 aa10.14□□□□□ -0.79
PRKCB-208ENST00000487674 MX1P20591 662 aa10.14□□□□□ -0.79
PRKCB-208ENST00000487674 ITGB8P26012 769 aa10.14□□□□□ -0.79
PRKCB-208ENST00000487674 SLC4A3P48751 1232 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms