RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 STX8Q9UNK0 236 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 SEPT4O43236 478 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
CLDN11-207ENST00000486975 CNGA1P29973 690 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 SLC1A4P43007 532 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 STAT2P52630 851 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
CLDN11-207ENST00000486975 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 FBXO40Q9UH90 709 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 FRMPD3Q5JV73 1810 aa17.04■□□□□ 0.32
CLDN11-207ENST00000486975 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 TMEM232C9JQI7 657 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 DNM1LO00429 736 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 NMT2O60551 498 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 PGK2P07205 417 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 TINF2Q9BSI4 451 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 RIPK3Q9Y572 518 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
CLDN11-207ENST00000486975 ALPK3Q96L96 1907 aa17.03■□□□□ 0.32
CLDN11-207ENST00000486975 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
CLDN11-207ENST00000486975 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
CLDN11-207ENST00000486975 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
CLDN11-207ENST00000486975 ARRDC4Q8NCT1 418 aa17.02■□□□□ 0.32
CLDN11-207ENST00000486975 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
CLDN11-207ENST00000486975 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
CLDN11-207ENST00000486975 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.31
CLDN11-207ENST00000486975 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
CLDN11-207ENST00000486975 MCCP23508 829 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 MAMDC4Q6UXC1 1216 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 DSCC1Q9BVC3 393 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
CLDN11-207ENST00000486975 ZNF536O15090 1300 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 PDE4AP27815 886 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 HAND2P61296 217 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 TKFCQ3LXA3 575 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
CLDN11-207ENST00000486975 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 C7orf61Q8IZ16 206 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 DDX11Q96FC9 970 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 TTC14Q96N46 770 aa17■□□□□ 0.31
CLDN11-207ENST00000486975 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
CLDN11-207ENST00000486975 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
CLDN11-207ENST00000486975 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLDN11-207ENST00000486975 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
CLDN11-207ENST00000486975 RRP12Q5JTH9 1297 aaKnown RBP16.99■□□□□ 0.31
CLDN11-207ENST00000486975 PRAMEF19Q5SWL8 479 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 KCTD1Q719H9 257 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 ESR2Q92731 530 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 PRR12Q9ULL5 1215 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 PLXNA1Q9UIW2 1896 aa16.99■□□□□ 0.31
CLDN11-207ENST00000486975 ZNF213O14771 459 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 ZNF865P0CJ78 1059 aaPredicted RBP16.98■□□□□ 0.31
CLDN11-207ENST00000486975 LRRC26Q2I0M4 334 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 TTC22Q5TAA0 569 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 ANKRD35Q8N283 1001 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 GDF15Q99988 308 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 ACAD9Q9H845 621 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
CLDN11-207ENST00000486975 CNPY2Q9Y2B0 182 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
CLDN11-207ENST00000486975 KBTBD13C9JR72 458 aa16.97■□□□□ 0.31
CLDN11-207ENST00000486975 RARBP10826 455 aa16.97■□□□□ 0.31
CLDN11-207ENST00000486975 AKR1A1P14550 325 aa16.97■□□□□ 0.31
CLDN11-207ENST00000486975 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
CLDN11-207ENST00000486975 BMP8BP34820 402 aa16.97■□□□□ 0.31
CLDN11-207ENST00000486975 SENP6Q9GZR1 1112 aaPredicted RBP16.97■□□□□ 0.31
CLDN11-207ENST00000486975 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
CLDN11-207ENST00000486975 NEDD4P46934 1319 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 RAD50Q92878 1312 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 PDHBP11177 359 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
CLDN11-207ENST00000486975 SLC4A3P48751 1232 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 LRRC41Q15345 812 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
CLDN11-207ENST00000486975 RASGRP2Q7LDG7 609 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 FAM133AQ8N9E0 248 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 FGD4Q96M96 766 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 RANBP17Q9H2T7 1088 aaKnown RBP16.96■□□□□ 0.31
CLDN11-207ENST00000486975 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 RNF146Q9NTX7 359 aa16.96■□□□□ 0.31
CLDN11-207ENST00000486975 SNAI1O95863 264 aaPredicted RBP16.95■□□□□ 0.3
CLDN11-207ENST00000486975 ICAM1P05362 532 aa16.95■□□□□ 0.3
CLDN11-207ENST00000486975 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
CLDN11-207ENST00000486975 SNX17Q15036 470 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms