RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	GNAS	Q5JWF2	1037 aa		18.67	■□□□□ 0.58
HDLBP-238	ENST00000479894	CLASRP	Q8N2M8	674 aa	Known RBP	18.67	■□□□□ 0.58
HDLBP-238	ENST00000479894	REPS2	Q8NFH8	660 aa		18.67	■□□□□ 0.58
HDLBP-238	ENST00000479894	ABHD16B	Q9H3Z7	469 aa		18.67	■□□□□ 0.58
HDLBP-238	ENST00000479894	PPP1R9A	Q9ULJ8	1098 aa		18.67	■□□□□ 0.58
HDLBP-238	ENST00000479894	DNAJC25-GNG10	A0A024R161	153 aa		18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	HLA-C	Q95604	372 aa		18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	LRRCC1	Q9C099	1032 aa		18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	MCM9	Q9NXL9	1143 aa		18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.66	■□□□□ 0.58
HDLBP-238	ENST00000479894	CABYR	O75952	493 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	MYOG	P15173	224 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	ATP2A2	P16615	1042 aa	Known RBP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	IRX5	P78411	483 aa	Predicted RBP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	TMEM67	Q5HYA8	995 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	DDX11	Q96FC9	970 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	CCDC17	Q96LX7	622 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	TEX13B	Q9BXU2	312 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	DBNL	Q9UJU6	430 aa	Known RBP	18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	EXOC6B	Q9Y2D4	811 aa		18.65	■□□□□ 0.58
HDLBP-238	ENST00000479894	MAGEB6P1	A0A0J9YX57	407 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	PRR33	A8MZF0	331 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	SMIM22	K7EJ46	135 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	CTAGE5	O15320	804 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	ADCY6	O43306	1168 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	PFKM	P08237	780 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	CCDC144B	Q3MJ40	725 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	RHPN1	Q8TCX5	695 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	NOC4L	Q9BVI4	516 aa	Known RBP	18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	FBXO28	Q9NVF7	368 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	UMODL1	Q5DID0	1318 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	SCN5A	Q14524	2016 aa		18.64	■□□□□ 0.57
HDLBP-238	ENST00000479894	CCDC136	Q96JN2	1154 aa		18.63	■□□□□ 0.57
HDLBP-238	ENST00000479894	SNX27	Q96L92	541 aa		18.63	■□□□□ 0.57
HDLBP-238	ENST00000479894	PPP4R2	Q9NY27	417 aa		18.63	■□□□□ 0.57
HDLBP-238	ENST00000479894	FAM86C2P	A6NEL3	165 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	AKR1B1	P15121	316 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	CCL23	P55773	120 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	EVX2	Q03828	476 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	CLEC10A	Q8IUN9	316 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	WNT8A	Q9H1J5	351 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	GOPC	Q9HD26	462 aa		18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.62	■□□□□ 0.57
HDLBP-238	ENST00000479894	ZBBX	A8MT70	800 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	RFXAP	O00287	272 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	ATP2A1	O14983	1001 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	CA3	P07451	260 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	IFIT2	P09913	472 aa	Known RBP	18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	MRE11	P49959	708 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	ITGA7	Q13683	1181 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	SMC5	Q8IY18	1101 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	GPATCH3	Q96I76	525 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	KCNH6	Q9H252	994 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	ANTXR1	Q9H6X2	564 aa		18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	GREB1L	Q9C091	1923 aa	Predicted RBP	18.61	■□□□□ 0.57
HDLBP-238	ENST00000479894	COL4A4	P53420	1690 aa	Predicted RBP	18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	SNRNP48	Q6IEG0	339 aa	Known RBP	18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	PHOSPHO2	Q8TCD6	241 aa		18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	VWCE	Q96DN2	955 aa		18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	SLC9A7	Q96T83	725 aa		18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	KANSL2	Q9H9L4	492 aa		18.6	■□□□□ 0.57
HDLBP-238	ENST00000479894	EEF2	P13639	858 aa	Known RBP	18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	FAM83B	Q5T0W9	1011 aa		18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	CXCL17	Q6UXB2	119 aa		18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	ARMCX2	Q7L311	632 aa		18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	FGD4	Q96M96	766 aa		18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	KATNBL1	Q9H079	304 aa		18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	TLR7	Q9NYK1	1049 aa	Known RBP	18.59	■□□□□ 0.57
HDLBP-238	ENST00000479894	GRIN2D	O15399	1336 aa		18.58	■□□□□ 0.57
HDLBP-238	ENST00000479894	EPOP	A6NHQ4	379 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	ZEB2	O60315	1214 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	B4GALT4	O60513	344 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	BEX3	Q00994	111 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	TTF1	Q15361	905 aa	Predicted RBP	18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	ANKRD45	Q5TZF3	282 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	AACS	Q86V21	672 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	SDR42E1	Q8WUS8	393 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	DYNLL2	Q96FJ2	89 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	AGBL1	Q96MI9	1066 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	SLF1	Q9BQI6	1058 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	LMCD1	Q9NZU5	365 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	RIPK3	Q9Y572	518 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	MYH4	Q9Y623	1939 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	TANC1	Q9C0D5	1861 aa		18.58	■□□□□ 0.56
HDLBP-238	ENST00000479894	CYP2D6	P10635	497 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	ACTN1	P12814	892 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	TNFAIP2	Q03169	654 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	TTLL4	Q14679	1199 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	KRT40	Q6A162	431 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	TET1	Q8NFU7	2136 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	EAF2	Q96CJ1	260 aa	Predicted RBP	18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	CERS4	Q9HA82	394 aa		18.57	■□□□□ 0.56
HDLBP-238	ENST00000479894	CD320	Q9NPF0	282 aa		18.57	■□□□□ 0.56

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