RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SAP30BPQ9UHR5 308 aaKnown RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FEZ2Q9UHY8 353 aaPredicted RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 VPS9D1Q9Y2B5 631 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SLC45A1Q9Y2W3 748 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 AFG3L2Q9Y4W6 797 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PCDHB14Q9Y5E9 798 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 HRH3Q9Y5N1 445 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 MRFAP1Q9Y605 127 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SHROOM2Q13796 1616 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 ADCY9O60503 1353 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 TTC36A6NLP5 189 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 ENC1O14682 589 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 OPA1O60313 960 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 TLR5O60602 858 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 RHOBTB3O94955 611 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CNOT4O95628 575 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 APBA3O96018 575 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 ADH1BP00325 375 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 HNRNPCP07910 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CELA3AP09093 270 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 MYBL2P10244 700 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 BPIP17213 487 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 LPOP22079 712 aaPredicted RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 INPP5BP32019 993 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 IGFALSP35858 605 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 GRK6P43250 576 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 MAPK9P45984 424 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PSEN2P49810 448 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 SOX10P56693 466 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 SH3BP2P78314 561 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CENPCQ03188 943 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PPP2R3AQ06190 1150 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PRKG2Q13237 762 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CLN3Q13286 438 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 GRM3Q14832 879 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PCBP1Q15365 356 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 NBPF1Q3BBV0 1214 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CFAP100Q494V2 611 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 TRIM61Q5EBN2 209 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 GJC2Q5T442 439 aaPredicted RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 C1QTNF12Q5T7M4 302 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 INTS11Q5TA45 600 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 FOXB2Q5VYV0 432 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 DUSP27Q5VZP5 1158 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 FAAH2Q6GMR7 532 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PKN3Q6P5Z2 889 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 RUFY4Q6ZNE9 571 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 C4orf50Q6ZRC1 276 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 BRINP3Q76B58 766 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 EPM2AIP1Q7L775 607 aaPredicted RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 CHST15Q7LFX5 561 aaPredicted RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PNMA8AQ86V59 439 aaPredicted RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 POTEDQ86YR6 584 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 ANKRD18AQ8IVF6 992 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 OR8H2Q8N162 312 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 MSL3Q8N5Y2 521 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 NUP133Q8WUM0 1156 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 POF1BQ8WVV4 589 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 GOLGA1Q92805 767 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 EXOC2Q96KP1 924 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 SUSD3Q96L08 255 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 NLRP3Q96P20 1036 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 AARSD1Q9BTE6 412 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 ABCB6Q9NP58 842 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 OSGEPQ9NPF4 335 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 RAB6BQ9NRW1 208 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 TSR3Q9UJK0 312 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 ISY1Q9ULR0 285 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 LRCH1Q9Y2L9 728 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 LRRFIP2Q9Y608 721 aaKnown RBP3.42□□□□□ -1.86
HMGN4-202ENST00000477243 KCNMB2Q9Y691 235 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 USP3Q9Y6I4 520 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 NEURL4Q96JN8 1562 aa3.42□□□□□ -1.86
HMGN4-202ENST00000477243 RPRD2Q5VT52 1461 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ARHGAP23Q9P227 1491 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ABCC2Q92887 1545 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 A0A0G2JS52 829 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 A0A1B0GVC2 190 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PABPN1LA6NDY0 278 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 MEIS3P2A8K0S8 358 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CYSRT1A8MQ03 144 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PRSS47A8MTI9 375 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PHF20L1A8MW92 1017 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 BHMG1C9JSJ3 638 aaPredicted RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 hCG_1984214I3L0E3 225 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 NEMP1O14524 444 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CTNND1O60716 968 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 LILRA1O75019 489 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 XYLBO75191 536 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ULK1O75385 1050 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 AGR2O95994 175 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 EGFRP00533 1210 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 HSPA8P11142 646 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ATICP31939 592 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 GABREP78334 506 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SLC7A5Q01650 507 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 RPL6Q02878 288 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PPFIA1Q13136 1202 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 TRIP4Q15650 581 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms