RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 CPXCR1Q8N123 301 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 KLHL6Q8WZ60 621 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 INSM2Q96T92 566 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-215ENST00000476664 PAGR1Q9BTK6 254 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-215ENST00000476664 ZCCHC2Q9C0B9 1178 aaKnown RBP8.47□□□□□ -1.05
LRCH3-215ENST00000476664 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 TIMMDC1Q9NPL8 285 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 STRN4Q9NRL3 753 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 RCAN3Q9UKA8 241 aa8.47□□□□□ -1.05
LRCH3-215ENST00000476664 APOBEC2Q9Y235 224 aaKnown RBP8.47□□□□□ -1.05
LRCH3-215ENST00000476664 GCC2Q8IWJ2 1684 aa8.46□□□□□ -1.05
LRCH3-215ENST00000476664 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.05
LRCH3-215ENST00000476664 NEXMIFQ5QGS0 1516 aa8.46□□□□□ -1.05
LRCH3-215ENST00000476664 NFKBIEO00221 500 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 TNFRSF10CO14798 259 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 EFCAB14O75071 495 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 B3GALT4O96024 378 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 PTPN5P54829 565 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 HTRA3P83110 453 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 PCBP1Q15365 356 aaKnown RBP eCLIP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ANO1Q5XXA6 986 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 OVOS1Q6IE37 1185 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ERAP2Q6P179 960 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 GRIN3AQ8TCU5 1115 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ATG4CQ96DT6 458 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 STRBPQ96SI9 672 aaKnown RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ELAC2Q9BQ52 826 aaKnown RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 TSEN34Q9BSV6 310 aaKnown RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 TRIM8Q9BZR9 551 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 LRP2BPQ9P2M1 347 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ZNF214Q9UL59 606 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 LUC7L2Q9Y383 392 aaKnown RBP8.46□□□□□ -1.06
LRCH3-215ENST00000476664 TNKSO95271 1327 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
LRCH3-215ENST00000476664 ADGRL2O95490 1459 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 OPA1O60313 960 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 MAP3K6O95382 1288 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 PYGMP11217 842 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 FGFR1P11362 822 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 PPM1FP49593 454 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-215ENST00000476664 ALFQ53S48 1182 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 OR2W6PQ8NHA6 318 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 PI4K2BQ8TCG2 481 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
LRCH3-215ENST00000476664 TTC17Q96AE7 1141 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 MENTQ9BUN1 341 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 TRIM39Q9HCM9 518 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 ZFATQ9P243 1243 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 PPP2R3BQ9Y5P8 575 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 ABCC5O15440 1437 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
LRCH3-215ENST00000476664 ERC2O15083 957 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 SPINT1O43278 529 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 SNUPNO95149 360 aaKnown RBP8.44□□□□□ -1.06
LRCH3-215ENST00000476664 CCND1P24385 295 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 PCDH1Q08174 1060 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 ZNF252P-AS1Q0IIN9 211 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 SAFBQ15424 915 aaKnown RBP eCLIP8.44□□□□□ -1.06
LRCH3-215ENST00000476664 PTPN21Q16825 1174 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
LRCH3-215ENST00000476664 YOD1Q5VVQ6 348 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-215ENST00000476664 CDCP2Q5VXM1 449 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 ANKRD42Q8N9B4 389 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 BSNDQ8WZ55 320 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 HERPUD2Q9BSE4 406 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 CNNM2Q9H8M5 875 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 ANKRD6Q9Y2G4 727 aa8.44□□□□□ -1.06
LRCH3-215ENST00000476664 TNPO3Q9Y5L0 923 aaKnown RBP8.44□□□□□ -1.06
LRCH3-215ENST00000476664 ANKRD34BA5PLL1 514 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 SLC22A31A6NKX4 558 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 KPNA6O60684 536 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 HSPA1AP0DMV8 641 aaKnown RBP8.43□□□□□ -1.06
LRCH3-215ENST00000476664 HSPA1BP0DMV9 641 aaKnown RBP8.43□□□□□ -1.06
LRCH3-215ENST00000476664 TIMP2P16035 220 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 NFKB1P19838 968 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 IGFALSP35858 605 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 PPP2R2AP63151 447 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 PTPN11Q06124 597 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-215ENST00000476664 GBX1Q14549 363 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 RGL3Q3MIN7 710 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 NSMFQ6X4W1 530 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 UBE2R2Q712K3 238 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-215ENST00000476664 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
LRCH3-215ENST00000476664 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms