RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 KLRF2D3W0D1 207 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 CPA1P15085 419 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
SCAF11-206ENST00000474828 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
SCAF11-206ENST00000474828 ADGRF4Q8IZF3 695 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 CHST13Q8NET6 341 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 ARMC5Q96C12 935 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 TCEANC2Q96MN5 208 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 MAF1Q9H063 256 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 JMJD4Q9H9V9 463 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 BRPF3Q9ULD4 1205 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 MTMR7Q9Y216 660 aa19.75■□□□□ 0.75
SCAF11-206ENST00000474828 CENPFP49454 3210 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 CCDC69A6NI79 296 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 CYTH3O43739 400 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 RBM25P49756 843 aaKnown RBP19.74■□□□□ 0.75
SCAF11-206ENST00000474828 RGS19P49795 217 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 Q6ZUG5 572 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 NUDT12Q9BQG2 462 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 LZTS2Q9BRK4 669 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 SPZ1Q9BXG8 430 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 UBA5Q9GZZ9 404 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 RAVER2Q9HCJ3 691 aaKnown RBP19.74■□□□□ 0.75
SCAF11-206ENST00000474828 SLC12A7Q9Y666 1083 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 PTCH2Q9Y6C5 1203 aa19.74■□□□□ 0.75
SCAF11-206ENST00000474828 DOCK3Q8IZD9 2030 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 DNAJC25-GNG10A0A024R161 153 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 KIF5BP33176 963 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 IKQ13123 557 aaPredicted RBP19.73■□□□□ 0.75
SCAF11-206ENST00000474828 MAP2K5Q13163 448 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 PPP2R5BQ15173 497 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 NBPF11Q86T75 865 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 FANCBQ8NB91 859 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 CHMP4CQ96CF2 233 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 AGBL1Q96MI9 1066 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 CPVLQ9H3G5 476 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 FBXO40Q9UH90 709 aa19.73■□□□□ 0.75
SCAF11-206ENST00000474828 GNAQP50148 359 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
SCAF11-206ENST00000474828 PLS1Q14651 629 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 NFXL1Q6ZNB6 911 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 NCAPG2Q86XI2 1143 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 CPXCR1Q8N123 301 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 SLAIN1Q8ND83 568 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 KIF2CQ99661 725 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 FAM217BQ9NTX9 383 aaPredicted RBP19.72■□□□□ 0.75
SCAF11-206ENST00000474828 HPS5Q9UPZ3 1129 aa19.72■□□□□ 0.75
SCAF11-206ENST00000474828 DIS3Q9Y2L1 958 aaKnown RBP19.72■□□□□ 0.75
SCAF11-206ENST00000474828 FCER1AP12319 257 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 RGS2P41220 211 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 FUT2Q10981 343 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 SAMD1Q6SPF0 538 aaPredicted RBP19.71■□□□□ 0.75
SCAF11-206ENST00000474828 CCAR1Q8IX12 1150 aaKnown RBP19.71■□□□□ 0.75
SCAF11-206ENST00000474828 TRMT44Q8IYL2 757 aaKnown RBP19.71■□□□□ 0.75
SCAF11-206ENST00000474828 RGS22Q8NE09 1264 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 CTCFLQ8NI51 663 aaPredicted RBP19.71■□□□□ 0.75
SCAF11-206ENST00000474828 MYL10Q9BUA6 226 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 IVNS1ABPQ9Y6Y0 642 aa19.71■□□□□ 0.75
SCAF11-206ENST00000474828 COBLO75128 1261 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 ADORA2AP29274 412 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 SNAP25P60880 206 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 GHRHRQ02643 423 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 CDC37Q16543 378 aaPredicted RBP19.7■□□□□ 0.74
SCAF11-206ENST00000474828 TMTC3Q6ZXV5 915 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 CLEC4DQ8WXI8 215 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 BRF1Q92994 677 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 APBA2Q99767 749 aa19.7■□□□□ 0.74
SCAF11-206ENST00000474828 UPF3BQ9BZI7 483 aaKnown RBP19.7■□□□□ 0.74
SCAF11-206ENST00000474828 ISY1Q9ULR0 285 aaKnown RBP19.7■□□□□ 0.74
SCAF11-206ENST00000474828 CTDP1Q9Y5B0 961 aaPredicted RBP19.7■□□□□ 0.74
SCAF11-206ENST00000474828 KLF18A0A0U1RQI7 1052 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ZBTB5O15062 677 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ZBTB43O43298 467 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ADCY3O60266 1144 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 GRK4P32298 578 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ZNF792Q3KQV3 632 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 MAP3K21Q5TCX8 1036 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 SYNE3Q6ZMZ3 975 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 SRBD1Q8N5C6 995 aaKnown RBP19.69■□□□□ 0.74
SCAF11-206ENST00000474828 RAET1EQ8TD07 263 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 NUP133Q8WUM0 1156 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ZNF274Q96GC6 653 aaPredicted RBP19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ZNF333Q96JL9 665 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 ACAD9Q9H845 621 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 RNF146Q9NTX7 359 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 RBM28Q9NW13 759 aaKnown RBP19.69■□□□□ 0.74
SCAF11-206ENST00000474828 CCPG1Q9ULG6 757 aa19.69■□□□□ 0.74
SCAF11-206ENST00000474828 PPP1R11O60927 126 aaPredicted RBP19.68■□□□□ 0.74
SCAF11-206ENST00000474828 APOBRQ0VD83 1088 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 OLFML2BQ68BL8 750 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 CCDC174Q6PII3 467 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 IL27Q8NEV9 243 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 TRERF1Q96PN7 1200 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 MMP19Q99542 508 aa19.68■□□□□ 0.74
SCAF11-206ENST00000474828 PNMA6FA0A0J9YX94 578 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 ECM2O94769 699 aaPredicted RBP19.67■□□□□ 0.74
SCAF11-206ENST00000474828 PLEKHA8P1O95397 391 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms