RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 JMJD4Q9H9V9 463 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 PNMA6FA0A0J9YX94 578 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 GOLGA8AA7E2F4 631 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 ZBTB5O15062 677 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 CDKL5O76039 1030 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 PSMC4P43686 418 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 LBX1P52954 281 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 AK2P54819 239 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 PLS1Q14651 629 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 TMTC3Q6ZXV5 915 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 RGS22Q8NE09 1264 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 RRP36Q96EU6 259 aaKnown RBP14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 AMNQ9BXJ7 453 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 MOV10L1Q9BXT6 1211 aaKnown RBP14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 UBA5Q9GZZ9 404 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 NAP1L2Q9ULW6 460 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 IVNS1ABPQ9Y6Y0 642 aa14.65□□□□□ -0.06
SPTLC1-204ENST00000469778 PCNTO95613 3336 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 TNPO2O14787 897 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 PFKFB2O60825 505 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SNRNP48Q6IEG0 339 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 PLEKHH3Q7Z736 793 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SOCS4Q8WXH5 440 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 MYL10Q9BUA6 226 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SLC5A4Q9NY91 659 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 MAP3K20Q9NYL2 800 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SEC63Q9UGP8 760 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 RLFQ13129 1914 aa14.64□□□□□ -0.07
SPTLC1-204ENST00000469778 SLC15A5A6NIM6 579 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 CPLX1O14810 134 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 FCER1AP12319 257 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 IFNAR1P17181 557 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 ERCC3P19447 782 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 CDC37Q16543 378 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 NCAPG2Q86XI2 1143 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 FBXO11Q86XK2 927 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 SRBD1Q8N5C6 995 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 TSKSQ9UJT2 592 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 CCPG1Q9ULG6 757 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 MRPL11Q9Y3B7 192 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 ZNF536O15090 1300 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 ABCB11O95342 1321 aa14.63□□□□□ -0.07
SPTLC1-204ENST00000469778 hCG_1984214I3L0E3 225 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 CYTH3O43739 400 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 XRCC5P13010 732 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 PTPREP23469 700 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 AKAP17AQ02040 695 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 FUT2Q10981 343 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 IRF5Q13568 498 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 KCTD2Q14681 263 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 GPR142Q7Z601 462 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 CTU1Q7Z7A3 348 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 MCF2L2Q86YR7 1114 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 TRIM22Q8IYM9 498 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 ZNF713Q8N859 430 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 TRIM47Q96LD4 638 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 NUDT12Q9BQG2 462 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 RNF26Q9BY78 433 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 ACAD9Q9H845 621 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 TPCN1Q9ULQ1 816 aa14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 DIS3Q9Y2L1 958 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-204ENST00000469778 PRPF3O43395 683 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 HOXC6P09630 235 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 RXRAP19793 462 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 ADD1P35611 737 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 CCDC174Q6PII3 467 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 AGBL1Q96MI9 1066 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 TRERF1Q96PN7 1200 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 PORCNQ9H237 461 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 PCDHA1Q9Y5I3 950 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 PFASO15067 1338 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
SPTLC1-204ENST00000469778 PARP14Q460N5 1801 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 PLEKHA8P1O95397 391 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 ALAS1P13196 640 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 CDC27P30260 824 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 RGS2P41220 211 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 GRB14Q14449 540 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 NTRK3Q16288 839 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms