RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TFRCP02786 760 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 SCNN1AP37088 669 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 GJA8P48165 433 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 UBXN2AP68543 259 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 NNTQ13423 1086 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 CEP85Q6P2H3 762 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 ZNF598Q86UK7 904 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 AACSQ86V21 672 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 FOXP4Q8IVH2 680 aaPredicted RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 CRACR2BQ8N4Y2 399 aaPredicted RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 KCTD17Q8N5Z5 321 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 MAGEB6Q8N7X4 407 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 U2AF1L4Q8WU68 220 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 P2RX7Q99572 595 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 ASCC2Q9H1I8 757 aaPredicted RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 OSBPL3Q9H4L5 887 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 GPR108Q9NPR9 543 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 RAB6BQ9NRW1 208 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 WASF2Q9Y6W5 498 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 ZNFX1Q9P2E3 1918 aaKnown RBP5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 FLT1P17948 1338 aa5.72□□□□□ -1.49
GTF3C3-208ENST00000455546 PLXNB2O15031 1838 aa5.71□□□□□ -1.49
GTF3C3-208ENST00000455546 TRIOBPQ9H2D6 2365 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 SMCHD1A6NHR9 2005 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 PRMT3O60678 531 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 SGPL1O95470 568 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 MAP4K4O95819 1239 aaPredicted RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 INHAP05111 366 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 GJB1P08034 283 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 USP5P45974 858 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 BACE1P56817 501 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 ERVK-9P63128 1117 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 PDE4CQ08493 712 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 ZYXQ15942 572 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 SIX5Q8N196 739 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 RHPN1Q8TCX5 695 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 COA7Q96BR5 231 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 EDC3Q96F86 508 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 ZNF512BQ96KM6 892 aaPredicted RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 PRIMPOLQ96LW4 560 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 DHX36Q9H2U1 1008 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 AS3MTQ9HBK9 375 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 TXNRD2Q9NNW7 524 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 HERC5Q9UII4 1024 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 GJD2Q9UKL4 321 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 ALPK3Q96L96 1907 aa5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 BAZ2AQ9UIF9 1905 aaKnown RBP5.71□□□□□ -1.5
GTF3C3-208ENST00000455546 C19orf81C9J6K1 198 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 J3QL48 77 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 LILRA1O75019 489 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 GH2P01242 217 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 ASNSP08243 561 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP2B6P20813 491 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 GCLCP48506 637 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 FXR1P51114 621 aaKnown RBP eCLIP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 PLCD1P51178 756 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 SEC13P55735 322 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 IRX3P78415 501 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 CBLBQ13191 982 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 NR5A1Q13285 461 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 RAB3GAP1Q15042 981 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 FAM110CQ1W6H9 321 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 UBE2Q1Q7Z7E8 422 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 SIRT2Q8IXJ6 389 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 TSEN2Q8NCE0 465 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 DIS3LQ8TF46 1054 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 PAWRQ96IZ0 340 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 HINFPQ9BQA5 517 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 WDR18Q9BV38 432 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 GZF1Q9H116 711 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 ZNF358Q9NW07 568 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 TMOD4Q9NZQ9 345 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 RBPJLQ9UBG7 517 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 ZBTB21Q9ULJ3 1066 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 LOC285556D6RIA3 1793 aa5.7□□□□□ -1.5
GTF3C3-208ENST00000455546 TTC24A2A3L6 582 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 TMEM229AB2RXF0 380 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 SMIM22K7EJ46 135 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 GOLIM4O00461 696 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 BRD1O95696 1058 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 CHGBP05060 677 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 POLR3DP05423 398 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 HLA-DOAP06340 250 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 HOXA7P31268 230 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 ADD1P35611 737 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 HERVK_113P62684 666 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 DHX9Q08211 1270 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 MAP3K12Q12852 859 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 PABPC4Q13310 644 aaKnown RBP eCLIP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 CERKLQ49MI3 558 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 SLC9C2Q5TAH2 1124 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms