RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ESRRAP11474 423 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 PRPHP41219 470 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 FAM50AQ14320 339 aaKnown RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 SART3Q15020 963 aaKnown RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF468Q5VIY5 522 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 TTLL5Q6EMB2 1281 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 MPRIPQ6WCQ1 1025 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 RUFY4Q6ZNE9 571 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 NOL8Q76FK4 1167 aaKnown RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 ARMCX6Q7L4S7 300 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM74Q86UV6 250 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM73Q86UV7 250 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 KRTAP1-3Q8IUG1 177 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 KCNF1Q9H3M0 494 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 VEZTQ9HBM0 779 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 CBX8Q9HC52 389 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 GNL3LQ9NVN8 582 aaKnown RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 CWC25Q9NXE8 425 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 CACNA2D2Q9NY47 1150 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 KLHL42Q9P2K6 505 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 MCM8Q9UJA3 840 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 BLOC1S6Q9UL45 172 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 PRR12Q9ULL5 1215 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 ARHGEF12Q9NZN5 1544 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 UHRF1BP1Q6BDS2 1440 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 PLA2R1Q13018 1463 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ATAD2BQ9ULI0 1458 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 EHBP1L1Q8N3D4 1523 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 MEIS3P2A8K0S8 358 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 B2RBV5 119 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 EIF3CLB5ME19 914 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PIK3R2O00459 728 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZSCAN9O15535 394 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 CCP110O43303 1012 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 DIAPH1O60610 1272 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 CAND2O75155 1236 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 VIL1P09327 827 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TPM1P09493 284 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PNMA6AP0CW24 399 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 SETSIPP0DME0 302 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 GCFC2P16383 781 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PTPRAP18433 802 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 EIF2AK2P19525 551 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELF1P32519 619 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ACTN2P35609 894 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PEX19P40855 299 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 MASP1P48740 699 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TPM4P67936 248 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PPP2R5EQ16537 467 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PLEKHG6Q3KR16 790 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TKFCQ3LXA3 575 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 MTERF2Q49AM1 385 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PERM1Q5SV97 790 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TEX35Q5T0J7 233 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 WLSQ5T9L3 541 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 AP1ARQ63HQ0 302 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 CDCA2Q69YH5 1023 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 FBXO38Q6PIJ6 1188 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 KRBA2Q6ZNG9 492 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 SPATC1Q76KD6 591 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 SYT9Q86SS6 491 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TTC6Q86TZ1 520 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 HSCBQ8IWL3 235 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 FAM178BQ8IXR5 827 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 CCDC191Q8NCU4 936 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ST13P5Q8NFI4 369 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF526Q8TF50 670 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 SMARCE1Q969G3 411 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF669Q96BR6 464 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM11Q96F44 468 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ERO1AQ96HE7 468 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 EIF3CQ99613 913 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TM9SF2Q99805 663 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 BAG1Q99933 345 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 THUMPD2Q9BTF0 503 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 UBE2OQ9C0C9 1292 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TMX4Q9H1E5 349 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 IGFLR1Q9H665 355 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 L2HGDHQ9H9P8 463 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRPV5Q9NQA5 729 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 AVENQ9NQS1 362 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 TOMM22Q9NS69 142 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 DDX56Q9NY93 547 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 NOP53Q9NZM5 478 aaKnown RBP4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 FMN1Q68DA7 1419 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 ELP1O95163 1332 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 PRR36Q9H6K5 1346 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 RALGAPBQ86X10 1494 aa4.18□□□□□ -1.74
HMGB3P8-201ENST00000449709 AK9Q5TCS8 1911 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ANKRD30BQ9BXX2 1392 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ARHGEF11O15085 1522 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 ITSN2Q9NZM3 1697 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 A0A087WUV0 522 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 FAM177BA6PVY3 158 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 KIF2AO00139 706 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 GFRA2O00451 464 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 GRIN3BO60391 1043 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 SIN3BO75182 1162 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 DDAH1O94760 285 aa4.17□□□□□ -1.74
HMGB3P8-201ENST00000449709 SASH1O94885 1247 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms