RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 COA7Q96BR5 231 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 JMJD4Q9H9V9 463 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 SLC25A27O95847 323 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 CALM1P0DP23 149 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 CALM2P0DP24 149 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 CALM3P0DP25 149 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 SYNE3Q6ZMZ3 975 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 FANCBQ8NB91 859 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 KIF2CQ99661 725 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 LARP6Q9BRS8 491 aaKnown RBP29.27■■■□□ 2.28
CPNE1-212ENST00000430570 PTPN22Q9Y2R2 807 aa29.27■■■□□ 2.28
CPNE1-212ENST00000430570 CYTH3O43739 400 aa29.26■■■□□ 2.27
CPNE1-212ENST00000430570 HOXD10P28358 340 aa29.26■■■□□ 2.27
CPNE1-212ENST00000430570 RBM25P49756 843 aaKnown RBP29.26■■■□□ 2.27
CPNE1-212ENST00000430570 ZBTB43O43298 467 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 DHX16O60231 1041 aaKnown RBP29.25■■■□□ 2.27
CPNE1-212ENST00000430570 PLEKHA8P1O95397 391 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 PTPREP23469 700 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 FLT3LGP49771 235 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 CMTR1Q8N1G2 835 aaKnown RBP29.25■■■□□ 2.27
CPNE1-212ENST00000430570 MCOLN1Q9GZU1 580 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 MROH8Q9H579 483 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 RIOX1Q9H6W3 641 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 CWC22Q9HCG8 908 aaKnown RBP29.25■■■□□ 2.27
CPNE1-212ENST00000430570 NAP1L2Q9ULW6 460 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-212ENST00000430570 SMCHD1A6NHR9 2005 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 PLXNB2O15031 1838 aa29.25■■■□□ 2.27
CPNE1-212ENST00000430570 ICAM1P05362 532 aa29.24■■■□□ 2.27
CPNE1-212ENST00000430570 KIF5BP33176 963 aa29.24■■■□□ 2.27
CPNE1-212ENST00000430570 CDC37Q16543 378 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-212ENST00000430570 MORN1Q5T089 497 aa29.24■■■□□ 2.27
CPNE1-212ENST00000430570 HPS5Q9UPZ3 1129 aa29.24■■■□□ 2.27
CPNE1-212ENST00000430570 PTCH2Q9Y6C5 1203 aa29.24■■■□□ 2.27
CPNE1-212ENST00000430570 EVCP57679 992 aa29.23■■■□□ 2.27
CPNE1-212ENST00000430570 SRBD1Q8N5C6 995 aaKnown RBP29.23■■■□□ 2.27
CPNE1-212ENST00000430570 MTMR8Q96EF0 704 aa29.23■■■□□ 2.27
CPNE1-212ENST00000430570 FAM217BQ9NTX9 383 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-212ENST00000430570 CCPG1Q9ULG6 757 aa29.23■■■□□ 2.27
CPNE1-212ENST00000430570 BAZ2BQ9UIF8 2168 aaKnown RBP29.23■■■□□ 2.27
CPNE1-212ENST00000430570 ALAS1P13196 640 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 CDC27P30260 824 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 PRMT2P55345 433 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 PKN2Q16513 984 aaKnown RBP29.22■■■□□ 2.27
CPNE1-212ENST00000430570 QRICH1Q2TAL8 776 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 FBXO46Q6PJ61 603 aaPredicted RBP29.22■■■□□ 2.27
CPNE1-212ENST00000430570 USP6NLQ92738 828 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 UPF2Q9HAU5 1272 aaKnown RBP29.22■■■□□ 2.27
CPNE1-212ENST00000430570 HOMER2Q9NSB8 354 aa29.22■■■□□ 2.27
CPNE1-212ENST00000430570 GOLGA8AA7E2F4 631 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 GOLGA8BA8MQT2 603 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 COPB2P35606 906 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 GRB14Q14449 540 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 RTN1Q16799 776 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 PIGSQ96S52 555 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 NUDT12Q9BQG2 462 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 ALDH8A1Q9H2A2 487 aaPredicted RBP29.21■■■□□ 2.27
CPNE1-212ENST00000430570 IVNS1ABPQ9Y6Y0 642 aa29.21■■■□□ 2.27
CPNE1-212ENST00000430570 SLC15A5A6NIM6 579 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 CYP2B6P20813 491 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 PDIA3P30101 505 aaKnown RBP29.2■■■□□ 2.27
CPNE1-212ENST00000430570 GNAQP50148 359 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 NEK4P51957 841 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 TMTC3Q6ZXV5 915 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 PIBF1Q8WXW3 757 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 TRERF1Q96PN7 1200 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 RNF146Q9NTX7 359 aa29.2■■■□□ 2.27
CPNE1-212ENST00000430570 STRNO43815 780 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 RCAN1P53805 252 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 AK2P54819 239 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 MUM1L1Q5H9M0 696 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 HOMER1Q86YM7 354 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 CCDC82Q8N4S0 544 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 CHST13Q8NET6 341 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 MMP19Q99542 508 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 LZTS2Q9BRK4 669 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 SPZ1Q9BXG8 430 aa29.2■■■□□ 2.26
CPNE1-212ENST00000430570 RBM28Q9NW13 759 aaKnown RBP29.2■■■□□ 2.26
CPNE1-212ENST00000430570 PPP1R11O60927 126 aaPredicted RBP29.19■■■□□ 2.26
CPNE1-212ENST00000430570 FCER1AP12319 257 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 SMARCA1P28370 1054 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 ADORA2AP29274 412 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 ADD1P35611 737 aaKnown RBP29.19■■■□□ 2.26
CPNE1-212ENST00000430570 METAP2P50579 478 aaKnown RBP eCLIP29.19■■■□□ 2.26
CPNE1-212ENST00000430570 MAP2K5Q13163 448 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 TKFCQ3LXA3 575 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 RAET1EQ8TD07 263 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 SOCS4Q8WXH5 440 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 TBC1D32Q96NH3 1257 aa29.19■■■□□ 2.26
CPNE1-212ENST00000430570 ZBTB5O15062 677 aa29.18■■■□□ 2.26
CPNE1-212ENST00000430570 COBLO75128 1261 aa29.18■■■□□ 2.26
CPNE1-212ENST00000430570 IRF5Q13568 498 aa29.18■■■□□ 2.26
CPNE1-212ENST00000430570 USH1GQ495M9 461 aa29.18■■■□□ 2.26
CPNE1-212ENST00000430570 ZNFX1Q9P2E3 1918 aaKnown RBP29.17■■■□□ 2.26
CPNE1-212ENST00000430570 CCT2P78371 535 aaKnown RBP29.17■■■□□ 2.26
CPNE1-212ENST00000430570 FBXO11Q86XK2 927 aa29.17■■■□□ 2.26
CPNE1-212ENST00000430570 ABRAQ8N0Z2 381 aa29.17■■■□□ 2.26
CPNE1-212ENST00000430570 NPLOC4Q8TAT6 608 aa29.17■■■□□ 2.26
CPNE1-212ENST00000430570 ACAD9Q9H845 621 aa29.17■■■□□ 2.26
CPNE1-212ENST00000430570 FBXO40Q9UH90 709 aa29.17■■■□□ 2.26
CPNE1-212ENST00000430570 NID2Q14112 1375 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms