RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DNM1LO00429 736 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 KDM4AO75164 1064 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 ALAS1P13196 640 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 TKFCQ3LXA3 575 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.67■□□□□ 0.9
NUP50-208ENST00000430547 AGBL1Q96MI9 1066 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 GPCPD1Q9NPB8 672 aa20.67■□□□□ 0.9
NUP50-208ENST00000430547 FRMPD2Q68DX3 1309 aaPredicted RBP20.67■□□□□ 0.9
NUP50-208ENST00000430547 DNAJC25-GNG10A0A024R161 153 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 RARBP10826 455 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 COL6A1P12109 1028 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 KRT23Q9C075 422 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 SENP6Q9GZR1 1112 aaPredicted RBP20.66■□□□□ 0.9
NUP50-208ENST00000430547 CCPG1Q9ULG6 757 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 SYNGAP1Q96PV0 1343 aa20.66■□□□□ 0.9
NUP50-208ENST00000430547 ZNF536O15090 1300 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 B4E1Z4 1266 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 PDHBP11177 359 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 CHMLP26374 656 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 SLC16A2P36021 539 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 SNAP25P60880 206 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 GJC2Q5T442 439 aaPredicted RBP20.65■□□□□ 0.9
NUP50-208ENST00000430547 SYDE2Q5VT97 1194 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 ZNF467Q7Z7K2 595 aaPredicted RBP20.65■□□□□ 0.9
NUP50-208ENST00000430547 DGKHQ86XP1 1220 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 TRERF1Q96PN7 1200 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 IL25Q9H293 177 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 KAT14Q9H8E8 782 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 MYH6P13533 1939 aa20.65■□□□□ 0.9
NUP50-208ENST00000430547 POTEB2H3BUK9 544 aa20.64■□□□□ 0.89
NUP50-208ENST00000430547 AKR1A1P14550 325 aa20.64■□□□□ 0.89
NUP50-208ENST00000430547 TTBK2Q6IQ55 1244 aa20.64■□□□□ 0.89
NUP50-208ENST00000430547 BTNL9Q6UXG8 535 aa20.64■□□□□ 0.89
NUP50-208ENST00000430547 UBAC1Q9BSL1 405 aa20.64■□□□□ 0.89
NUP50-208ENST00000430547 ZHX1Q9UKY1 873 aaPredicted RBP20.64■□□□□ 0.89
NUP50-208ENST00000430547 ICAM1P05362 532 aa20.63■□□□□ 0.89
NUP50-208ENST00000430547 TRDNQ13061 729 aa20.63■□□□□ 0.89
NUP50-208ENST00000430547 GPATCH4Q5T3I0 446 aaKnown RBP20.63■□□□□ 0.89
NUP50-208ENST00000430547 MAMDC4Q6UXC1 1216 aa20.63■□□□□ 0.89
NUP50-208ENST00000430547 PNMA1Q8ND90 353 aa20.63■□□□□ 0.89
NUP50-208ENST00000430547 ZSCAN10Q96SZ4 725 aaPredicted RBP20.63■□□□□ 0.89
NUP50-208ENST00000430547 RANBP17Q9H2T7 1088 aaKnown RBP20.63■□□□□ 0.89
NUP50-208ENST00000430547 A1CFQ9NQ94 594 aaKnown RBP20.63■□□□□ 0.89
NUP50-208ENST00000430547 XPNPEP3Q9NQH7 507 aa20.63■□□□□ 0.89
NUP50-208ENST00000430547 SLC34A2O95436 690 aa20.62■□□□□ 0.89
NUP50-208ENST00000430547 TAL1P17542 331 aaPredicted RBP20.62■□□□□ 0.89
NUP50-208ENST00000430547 ZNF543Q08ER8 600 aa20.62■□□□□ 0.89
NUP50-208ENST00000430547 LRRC26Q2I0M4 334 aa20.62■□□□□ 0.89
NUP50-208ENST00000430547 ZSWIM5Q9P217 1185 aa20.62■□□□□ 0.89
NUP50-208ENST00000430547 PNMA2Q9UL42 364 aa20.62■□□□□ 0.89
NUP50-208ENST00000430547 ZMYND8Q9ULU4 1186 aaPredicted RBP20.62■□□□□ 0.89
NUP50-208ENST00000430547 U3KPZ7 1027 aaPredicted RBP20.62■□□□□ 0.89
NUP50-208ENST00000430547 TNKSO95271 1327 aa20.61■□□□□ 0.89
NUP50-208ENST00000430547 ZNF865P0CJ78 1059 aaPredicted RBP20.61■□□□□ 0.89
NUP50-208ENST00000430547 ATN1P54259 1190 aaPredicted RBP20.61■□□□□ 0.89
NUP50-208ENST00000430547 LRRC41Q15345 812 aa20.61■□□□□ 0.89
NUP50-208ENST00000430547 NSMFQ6X4W1 530 aa20.61■□□□□ 0.89
NUP50-208ENST00000430547 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
NUP50-208ENST00000430547 RNF180Q86T96 592 aa20.61■□□□□ 0.89
NUP50-208ENST00000430547 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.61■□□□□ 0.89
NUP50-208ENST00000430547 FAM184BQ9ULE4 1060 aa20.61■□□□□ 0.89
NUP50-208ENST00000430547 TRIOBPQ9H2D6 2365 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 DNAH12Q6ZR08 3092 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 SGSM2O43147 1006 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 SNAI1O95863 264 aaPredicted RBP20.6■□□□□ 0.89
NUP50-208ENST00000430547 SNHG28P0DPA3 235 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 SYN1P17600 705 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 CNTN2Q02246 1040 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 MUM1L1Q5H9M0 696 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 ARMCX2Q7L311 632 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 ENAHQ8N8S7 591 aaPredicted RBP20.6■□□□□ 0.89
NUP50-208ENST00000430547 ABHD16BQ9H3Z7 469 aa20.6■□□□□ 0.89
NUP50-208ENST00000430547 RBM27Q9P2N5 1060 aaKnown RBP20.6■□□□□ 0.89
NUP50-208ENST00000430547 LCTP09848 1927 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 ASB14A6NK59 587 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 GOLGA8HP0CJ92 632 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 PTH1RQ03431 593 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 ACVR2BQ13705 512 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 IFIT1BQ5T764 474 aaKnown RBP20.59■□□□□ 0.89
NUP50-208ENST00000430547 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
NUP50-208ENST00000430547 CCDC144CPQ8IYA2 1237 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 FAM133AQ8N9E0 248 aa20.59■□□□□ 0.89
NUP50-208ENST00000430547 PGK1P00558 417 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 ASPRV1Q53RT3 343 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 ANKS1AQ92625 1134 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 FGD4Q96M96 766 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 CYP39A1Q9NYL5 469 aa20.58■□□□□ 0.89
NUP50-208ENST00000430547 LRRC37A2A6NM11 1700 aa20.58■□□□□ 0.88
NUP50-208ENST00000430547 DHX16O60231 1041 aaKnown RBP20.57■□□□□ 0.88
NUP50-208ENST00000430547 CYP21A2P08686 494 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 ADCYAP1R1P41586 468 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 LENG1Q96BZ8 264 aaPredicted RBP20.57■□□□□ 0.88
NUP50-208ENST00000430547 SPC25Q9HBM1 224 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 PRKAG2Q9UGJ0 569 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 ATP11BQ9Y2G3 1177 aa20.57■□□□□ 0.88
NUP50-208ENST00000430547 WDR19Q8NEZ3 1342 aa20.56■□□□□ 0.88
NUP50-208ENST00000430547 ERICH2A1L162 156 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms