RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 AK2P54819 239 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 FUT2Q10981 343 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 TRAF1Q13077 416 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 CHST13Q8NET6 341 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 SOCS4Q8WXH5 440 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 PORCNQ9H237 461 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
ATG4B-207ENST00000415107 FBXO40Q9UH90 709 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
ATG4B-207ENST00000415107 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 ZBTB5O15062 677 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 ERCC3P19447 782 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 CTGFP29279 349 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 PSMC4P43686 418 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 GHRHRQ02643 423 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 GRB14Q14449 540 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 CDC37Q16543 378 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-207ENST00000415107 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
ATG4B-207ENST00000415107 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 CD99L2Q8TCZ2 262 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
ATG4B-207ENST00000415107 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
ATG4B-207ENST00000415107 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 hCG_1984214I3L0E3 225 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 PFKFB2O60825 505 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 PLEKHA8P1O95397 391 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 HOXC6P09630 235 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 RXRAP19793 462 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 HOXD10P28358 340 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 CDC27P30260 824 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 MCM2P49736 904 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 CAP1Q01518 475 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 IRF5Q13568 498 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 NTRK3Q16288 839 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
ATG4B-207ENST00000415107 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 MORN1Q5T089 497 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 OTOP1Q7RTM1 612 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
ATG4B-207ENST00000415107 ZNF713Q8N859 430 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-207ENST00000415107 USP6NLQ92738 828 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 COA7Q96BR5 231 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 SRRDQ9UH36 339 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
ATG4B-207ENST00000415107 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-207ENST00000415107 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.2
ATG4B-207ENST00000415107 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 SLC15A5A6NIM6 579 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
ATG4B-207ENST00000415107 ST18O60284 1047 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 IFNAR1P17181 557 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 PTPREP23469 700 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 PLEKHH3Q7Z736 793 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
ATG4B-207ENST00000415107 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-207ENST00000415107 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 AMNQ9BXJ7 453 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-207ENST00000415107 CPVLQ9H3G5 476 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 RAVER2Q9HCJ3 691 aaKnown RBP13.82□□□□□ -0.2
ATG4B-207ENST00000415107 GJD2Q9UKL4 321 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 RIPK3Q9Y572 518 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 ABCB11O95342 1321 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 MYH6P13533 1939 aa13.82□□□□□ -0.2
ATG4B-207ENST00000415107 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 PEX10O60683 326 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 PLS1Q14651 629 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 CPXCR1Q8N123 301 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 ZSCAN31Q96LW9 406 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 ARHGAP39Q9C0H5 1083 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 SH2B1Q9NRF2 756 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
ATG4B-207ENST00000415107 IVNS1ABPQ9Y6Y0 642 aa13.81□□□□□ -0.2
ATG4B-207ENST00000415107 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 CDKL5O76039 1030 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 FMNL1O95466 1100 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 IGHA2P01877 340 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 FCER1AP12319 257 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 SCRN1Q12765 414 aa13.8□□□□□ -0.2
ATG4B-207ENST00000415107 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
ATG4B-207ENST00000415107 ME3Q16798 604 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms