RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 BEX3Q00994 111 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 TNFAIP2Q03169 654 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 TAP1Q03518 808 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 TTF1Q15361 905 aaPredicted RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FSCN1Q16658 493 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 PUS10Q3MIT2 529 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 LEXMQ3ZCV2 418 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM83BQ5T0W9 1011 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 KRT40Q6A162 431 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SNRNP48Q6IEG0 339 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARMCX2Q7L311 632 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 DEFB128Q7Z7B8 93 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 TLK2Q86UE8 772 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SIAH1Q8IUQ4 282 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 HERC6Q8IVU3 1022 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 AMOTL1Q8IY63 956 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM9BQ8IZU0 186 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CPXCR1Q8N123 301 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 ANKRD35Q8N283 1001 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 PRPF38AQ8NAV1 312 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 RETREG2Q8NC44 543 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CHST13Q8NET6 341 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 REPS2Q8NFH8 660 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SCLYQ96I15 445 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 MFSD14AQ96MC6 490 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 AGBL1Q96MI9 1066 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLF1Q9BQI6 1058 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 RIOK1Q9BRS2 568 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 UPF3BQ9BZI7 483 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FTOQ9C0B1 505 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 TRPV6Q9H1D0 765 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 UBE2ZQ9H832 354 aaPredicted RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 KANSL2Q9H9L4 492 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FBXO28Q9NVF7 368 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FBXO40Q9UH90 709 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 DBNLQ9UJU6 430 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 GNEQ9Y223 722 aaKnown RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM50BQ9Y247 325 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 Q9Y3F1 56 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CTDP1Q9Y5B0 961 aaPredicted RBP2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 CHD7Q9P2D1 2997 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF536O15090 1300 aa2.86□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF318Q5VUA4 2279 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 EPG5Q9HCE0 2579 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SPTBN2O15020 2390 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PNMA6EA0A0J9YXQ4 647 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 POTEB3A0JP26 581 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 GRXCR2A6NFK2 248 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ASB14A6NK59 587 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 USP17L12C9JPN9 530 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 USP17L21D6R901 530 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ATP2A1O14983 1001 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 IPO8O15397 1037 aaKnown RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ADCY6O43306 1168 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ANP32CO43423 234 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 LPXNO60711 386 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZBED4O75132 1171 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 BAIAP3O94812 1187 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 FDX1P10109 184 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 CYP2C9P11712 490 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 EEF2P13639 858 aaKnown RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 IL9P15248 144 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SMPD1P17405 629 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCNJ6P48051 423 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 OAZ1P54368 228 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLFN5Q08AF3 891 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 BFSP2Q13515 415 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PKN1Q16512 942 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 BRDTQ58F21 947 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC9C2Q5TAH2 1124 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 IQSEC1Q6DN90 963 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PTCRAQ6ISU1 281 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 POTEBQ6S5H4 581 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 CLEC10AQ8IUN9 316 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC144CPQ8IYA2 1237 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SDR42E1Q8WUS8 393 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARHGAP45Q92619 1136 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 KIFC2Q96AC6 838 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 VWCEQ96DN2 955 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 DYNLL2Q96FJ2 89 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 DDRGK1Q96HY6 314 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 FGD4Q96M96 766 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 TGS1Q96RS0 853 aaKnown RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PRRX2Q99811 253 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZBED2Q9BTP6 218 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 KATNBL1Q9H079 304 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ALDH8A1Q9H2A2 487 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 ANTXR1Q9H6X2 564 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 SUGCTQ9HAC7 445 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 RAVER2Q9HCJ3 691 aaKnown RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 DCP1AQ9NPI6 582 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 GPHNQ9NQX3 736 aaPredicted RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 TRMT13Q9NUP7 481 aaKnown RBP2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 PRKAG3Q9UGI9 489 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 CTNNA3Q9UI47 895 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 NOD1Q9Y239 953 aa2.85□□□□□ -1.95
RNU4-53P-201ENST00000410828 RIPK3Q9Y572 518 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms