RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TCTN2Q96GX1 697 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 CYP26B1Q9NR63 512 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 IFT57Q9NWB7 429 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 PRKAB1Q9Y478 270 aa7.31□□□□□ -1.24
LSM5-206ENST00000409987 DNAJC25-GNG10A0A024R161 153 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 EIF5BO60841 1220 aaKnown RBP7.3□□□□□ -1.24
LSM5-206ENST00000409987 RFPL3O75679 317 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 SCG5P05408 212 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 CD3EP07766 207 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 KCNJ6P48051 423 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 POU4F1Q01851 419 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 MAP4K2Q12851 820 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 NTRK3Q16288 839 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 CPSF6Q16630 551 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM5-206ENST00000409987 PRSS53Q2L4Q9 553 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
LSM5-206ENST00000409987 PLD6Q8N2A8 252 aaKnown RBP7.3□□□□□ -1.24
LSM5-206ENST00000409987 TMEM145Q8NBT3 493 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 KCTD13Q8WZ19 329 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 NINJ1Q92982 152 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
LSM5-206ENST00000409987 GPATCH2Q9NW75 528 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
LSM5-206ENST00000409987 BLACEA4D250 179 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 PRR19A6NJB7 356 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 H3BS24 57 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 STXBP3O00186 592 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 DNAJC6O75061 913 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 BMP8BP34820 402 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 ECI1P42126 302 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 MASP1P48740 699 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 CLCN7P51798 805 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 SCRN1Q12765 414 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 PTPROQ16827 1216 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 GAB4Q2WGN9 574 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 FNDC3BQ53EP0 1204 aaKnown RBP7.29□□□□□ -1.24
LSM5-206ENST00000409987 SLC35F1Q5T1Q4 408 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 CWF19L1Q69YN2 538 aaKnown RBP7.29□□□□□ -1.24
LSM5-206ENST00000409987 CCDC140Q96MF4 163 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 FCRL3Q96P31 734 aaPredicted RBP7.29□□□□□ -1.24
LSM5-206ENST00000409987 SLC12A9Q9BXP2 914 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 MRPL4Q9BYD3 311 aaKnown RBP7.29□□□□□ -1.24
LSM5-206ENST00000409987 SPC25Q9HBM1 224 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 SEMA3GQ9NS98 782 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 ZSWIM5Q9P217 1185 aa7.29□□□□□ -1.24
LSM5-206ENST00000409987 AURKAO14965 403 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 CYP26A1O43174 497 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 DYRK3O43781 588 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 IFNGR1P15260 489 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 VAV1P15498 845 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 TPP2P29144 1249 aaPredicted RBP7.28□□□□□ -1.24
LSM5-206ENST00000409987 TM4SF20Q53R12 229 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 TAF7LQ5H9L4 462 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 DENND5AQ6IQ26 1287 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 DHX37Q8IY37 1157 aaKnown RBP7.28□□□□□ -1.24
LSM5-206ENST00000409987 NIM1KQ8IY84 436 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 COPS5Q92905 334 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 UBE2FQ969M7 185 aa7.28□□□□□ -1.24
LSM5-206ENST00000409987 IRS4O14654 1257 aaPredicted RBP7.27□□□□□ -1.25
LSM5-206ENST00000409987 ZNF205O95201 554 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 CPP00450 1065 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 SYPP08247 313 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
LSM5-206ENST00000409987 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 SLC7A14Q8TBB6 771 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 NETO1Q8TDF5 533 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 MFSD3Q96ES6 412 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 PIM2Q9P1W9 311 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
LSM5-206ENST00000409987 BACE2Q9Y5Z0 518 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 PITPNM2Q9BZ72 1349 aa7.27□□□□□ -1.25
LSM5-206ENST00000409987 C2orf71A6NGG8 1288 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 THBDP07204 575 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 FOSL1P15407 271 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 SDSP20132 328 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 RTP2Q5QGT7 225 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 ANKRD13AQ8IZ07 590 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 LINC00116Q8NCU8 138 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 NPLOC4Q8TAT6 608 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 FRS2Q8WU20 508 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 NDOR1Q9UHB4 597 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 SFMBT1Q9UHJ3 866 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 SNX11Q9Y5W9 270 aa7.26□□□□□ -1.25
LSM5-206ENST00000409987 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
LSM5-206ENST00000409987 ARNTLO00327 626 aa7.25□□□□□ -1.25
LSM5-206ENST00000409987 MSTNO14793 375 aa7.25□□□□□ -1.25
LSM5-206ENST00000409987 KCNQ2O43526 872 aa7.25□□□□□ -1.25
LSM5-206ENST00000409987 VIL1P09327 827 aaKnown RBP7.25□□□□□ -1.25
LSM5-206ENST00000409987 HOXA10P31260 410 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms