RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IMPDH2P12268 514 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 VIPR1P32241 457 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 CLCQ05315 142 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
CLK1-203ENST00000409769 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
CLK1-203ENST00000409769 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
CLK1-203ENST00000409769 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
CLK1-203ENST00000409769 RASGRP4Q8TDF6 673 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 NKD1Q969G9 470 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 RELTQ969Z4 430 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 UBP1Q9NZI7 540 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.04□□□□□ -1.28
CLK1-203ENST00000409769 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
CLK1-203ENST00000409769 PI3P19957 117 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 GJA8P48165 433 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 SSPNQ14714 243 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
CLK1-203ENST00000409769 SLC6A18Q96N87 628 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 ERVK13-1Q9NX77 482 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 FBXL21Q9UKT6 434 aa7.03□□□□□ -1.28
CLK1-203ENST00000409769 GPR55Q9Y2T6 319 aaPredicted RBP7.03□□□□□ -1.28
CLK1-203ENST00000409769 EIF4G1Q04637 1599 aaKnown RBP7.03□□□□□ -1.28
CLK1-203ENST00000409769 RSF1Q96T23 1441 aaPredicted RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 IRS4O14654 1257 aaPredicted RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 SASH1O94885 1247 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 EFEMP2O95967 443 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 GSNP06396 782 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 AUHQ13825 339 aaKnown RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 SLCO6A1Q86UG4 719 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 TMEM192Q8IY95 271 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 DACT3Q96B18 629 aaPredicted RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
CLK1-203ENST00000409769 C20orf173Q96LM9 149 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 PLCD4Q9BRC7 762 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 KRTAP4-11Q9BYQ6 195 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 CNTD2Q9H8S5 307 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 ACSL6Q9UKU0 697 aa7.02□□□□□ -1.29
CLK1-203ENST00000409769 PEG3Q9GZU2 1588 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 CYP4F8P98187 520 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 PAK2Q13177 524 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 ZPBP2Q6X784 338 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 TAB3Q8N5C8 712 aaPredicted RBP7.01□□□□□ -1.29
CLK1-203ENST00000409769 MZB1Q8WU39 189 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 CDADC1Q9BWV3 514 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 RTEL1Q9NZ71 1219 aa7.01□□□□□ -1.29
CLK1-203ENST00000409769 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
CLK1-203ENST00000409769 VAV1P15498 845 aa7□□□□□ -1.29
CLK1-203ENST00000409769 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
CLK1-203ENST00000409769 ERICH6BQ5W0A0 696 aa7□□□□□ -1.29
CLK1-203ENST00000409769 SP8Q8IXZ3 490 aa7□□□□□ -1.29
CLK1-203ENST00000409769 C7orf61Q8IZ16 206 aa7□□□□□ -1.29
CLK1-203ENST00000409769 DSCC1Q9BVC3 393 aa7□□□□□ -1.29
CLK1-203ENST00000409769 TNFRSF12AQ9NP84 129 aa7□□□□□ -1.29
CLK1-203ENST00000409769 KLHL14Q9P2G3 628 aa7□□□□□ -1.29
CLK1-203ENST00000409769 TRIM13O60858 407 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 PRKCAP17252 672 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 BUD31P41223 144 aaPredicted RBP6.99□□□□□ -1.29
CLK1-203ENST00000409769 CTSKP43235 329 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 SOX9P48436 509 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 EPHB3P54753 998 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 CBX2Q14781 532 aaPredicted RBP6.99□□□□□ -1.29
CLK1-203ENST00000409769 NFIXQ14938 502 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 NR1I3Q14994 352 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 RAB3GAP1Q15042 981 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 HLA-DQA1Q5Y7H0 255 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 CWF19L1Q69YN2 538 aaKnown RBP6.99□□□□□ -1.29
CLK1-203ENST00000409769 NUP43Q8NFH3 380 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 GPRASP2Q96D09 838 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 SLC9A7Q96T83 725 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 ZNRF3Q9ULT6 936 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 WIZO95785 1651 aa6.99□□□□□ -1.29
CLK1-203ENST00000409769 A0A0G2JLL6 359 aaPredicted RBP6.98□□□□□ -1.29
CLK1-203ENST00000409769 SYN1P17600 705 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 CDR1P51861 262 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 CAP1Q01518 475 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 CNKSR3Q6P9H4 555 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 CYP2R1Q6VVX0 501 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 LDHDQ86WU2 507 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 CCDC144CPQ8IYA2 1237 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 RBBP8NLQ8NC74 664 aaPredicted RBP6.98□□□□□ -1.29
CLK1-203ENST00000409769 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 MINPP1Q9UNW1 487 aa6.98□□□□□ -1.29
CLK1-203ENST00000409769 A0A1W2PQ27 194 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 A0A1W2PQ64 194 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 A0A1W2PQC6 194 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 A0A1W2PQD8 194 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 MEIS1O00470 390 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 ERCC5P28715 1186 aaPredicted RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 NOP2P46087 812 aaKnown RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
CLK1-203ENST00000409769 CRTC3Q6UUV7 619 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 TMC6Q7Z403 805 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 FAM129CQ86XR2 697 aa6.97□□□□□ -1.29
CLK1-203ENST00000409769 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms