RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 EEF2P13639 858 aaKnown RBP18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 ZNF34Q8IZ26 560 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 ATP6V0A2Q9Y487 856 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 NFE2L3Q9Y4A8 694 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 BTBD18B2RXH4 712 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 CRKP46108 304 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 CDK8P49336 464 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 FANCCQ00597 558 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 TIGD1Q96MW7 591 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 STMN4Q9H169 189 aaPredicted RBP18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 KIAA1468Q9P260 1216 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 ARID5AQ03989 594 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 SYDE2Q5VT97 1194 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 GPBP1Q86WP2 473 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
PCDHA13-202ENST00000409494 TNNC1P63316 161 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 SCRN1Q12765 414 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 FAM107BQ9H098 131 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 TFDP1Q14186 410 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 MCM6Q14566 821 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 SLC39A14Q15043 492 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 ASIC2Q16515 512 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 EPHA10Q5JZY3 1008 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 ZNF589Q86UQ0 364 aaPredicted RBP18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 SMAP1Q8IYB5 467 aaPredicted RBP18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 RGL2O15211 777 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 CA8P35219 290 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 SPON1Q9HCB6 807 aa18.61■□□□□ 0.57
PCDHA13-202ENST00000409494 PFKFB1P16118 471 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 GAP43P17677 238 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 MIS12Q9H081 205 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 STK17AQ9UEE5 414 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 hCG_1642624A0A1W2PR95 340 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 HARSP12081 509 aaKnown RBP18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 SEPT2Q15019 361 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 DYMQ7RTS9 669 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 SERTAD1Q9UHV2 236 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 COPB2P35606 906 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 AOC3Q16853 763 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 DPP9Q86TI2 863 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 SSX2IPQ9Y2D8 614 aa18.6■□□□□ 0.57
PCDHA13-202ENST00000409494 MROH7-TTC4A0A0A0MT08 1334 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 KCNQ2O43526 872 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 GOLGA8HP0CJ92 632 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 KRT5P13647 590 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 KARSQ15046 597 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 KIAA1524Q8TCG1 905 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 CELF1Q92879 486 aaKnown RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 CCDC113Q9H0I3 377 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 PNMA6FA0A0J9YX94 578 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 NDC80O14777 642 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 ECE2O60344 883 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 AP3B2Q13367 1082 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 ORC2Q13416 577 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 GSDMAQ96QA5 445 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 VPS16Q9H269 839 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 ZSWIM5Q9P217 1185 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 SEL1L2Q5TEA6 688 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 RSPH3Q86UC2 560 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 LZTFL1Q9NQ48 299 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 PODXL2Q9NZ53 605 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 TRPC6Q9Y210 931 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
PCDHA13-202ENST00000409494 MAP2K1Q02750 393 aaPredicted RBP18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 DIXDC1Q155Q3 683 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 SLC10A4Q96EP9 437 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 IQCA1LA6NCM1 817 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 XPOTO43592 962 aaKnown RBP18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 PTGDRQ13258 359 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 FAM178BQ8IXR5 827 aa18.58■□□□□ 0.57
PCDHA13-202ENST00000409494 TECP42680 631 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 KRBA2Q6ZNG9 492 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 ZEB2O60315 1214 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 NR1I2O75469 434 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 FOXO4P98177 505 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 PPP1R18Q6NYC8 613 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 FAM81BQ96LP2 452 aa18.58■□□□□ 0.56
PCDHA13-202ENST00000409494 HSF2BPO75031 334 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 CCDC122Q5T0U0 273 aa18.57■□□□□ 0.56
PCDHA13-202ENST00000409494 CPS1P31327 1500 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms