RNA–Protein interactions for RNA: ENST00000403506.1

CLHC1-202, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-202ENST00000403506 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
CLHC1-202ENST00000403506 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
CLHC1-202ENST00000403506 MTMR7Q9Y216 660 aa12.76□□□□□ -0.37
CLHC1-202ENST00000403506 PFASO15067 1338 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 ZNF536O15090 1300 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
CLHC1-202ENST00000403506 COL11A1P12107 1806 aaPredicted RBP12.75□□□□□ -0.37
CLHC1-202ENST00000403506 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
CLHC1-202ENST00000403506 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
CLHC1-202ENST00000403506 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
CLHC1-202ENST00000403506 LSG1Q9H089 658 aaKnown RBP12.75□□□□□ -0.37
CLHC1-202ENST00000403506 TNKSO95271 1327 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 E7EWF7 191 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 COL6A1P12109 1028 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 CNGA1P29973 690 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 TRAF1Q13077 416 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 KCTD2Q14681 263 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 ASPRV1Q53RT3 343 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 TTBK2Q6IQ55 1244 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 FGD4Q96M96 766 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 MAF1Q9H063 256 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
CLHC1-202ENST00000403506 DDX20Q9UHI6 824 aaKnown RBP12.74□□□□□ -0.37
CLHC1-202ENST00000403506 MCM5P33992 734 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 SLC16A2P36021 539 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLHC1-202ENST00000403506 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
CLHC1-202ENST00000403506 CHST13Q8NET6 341 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 C11orf49Q9H6J7 331 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 HOMER2Q9NSB8 354 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
CLHC1-202ENST00000403506 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
CLHC1-202ENST00000403506 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 IFIT3O14879 490 aaKnown RBP12.72□□□□□ -0.37
CLHC1-202ENST00000403506 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 PDHBP11177 359 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 WTAPQ15007 396 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 TINF2Q9BSI4 451 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
CLHC1-202ENST00000403506 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
CLHC1-202ENST00000403506 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 DNAH12Q6ZR08 3092 aa12.72□□□□□ -0.37
CLHC1-202ENST00000403506 SLC27A2O14975 620 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 SEPT4O43236 478 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 EVI5O60447 810 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 SNAI1O95863 264 aaPredicted RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 ZNF865P0CJ78 1059 aaPredicted RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 MUM1L1Q5H9M0 696 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 HABP4Q5JVS0 413 aaKnown RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 LENG1Q96BZ8 264 aaPredicted RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
CLHC1-202ENST00000403506 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
CLHC1-202ENST00000403506 ASTN1O14525 1302 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CALM1P0DP23 149 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CALM2P0DP24 149 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CALM3P0DP25 149 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 KIF5BP33176 963 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CNTN2Q02246 1040 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 SEC23AQ15436 765 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
CLHC1-202ENST00000403506 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
CLHC1-202ENST00000403506 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
CLHC1-202ENST00000403506 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
CLHC1-202ENST00000403506 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
CLHC1-202ENST00000403506 MSCO60682 206 aa12.69□□□□□ -0.38
CLHC1-202ENST00000403506 ICAM1P05362 532 aa12.69□□□□□ -0.38
CLHC1-202ENST00000403506 GOLGA8HP0CJ92 632 aa12.69□□□□□ -0.38
CLHC1-202ENST00000403506 ALAS1P13196 640 aa12.69□□□□□ -0.38
CLHC1-202ENST00000403506 PSMA5P28066 241 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms