RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.23■□□□□ 0.83
HDAC11-202ENST00000402259 CCAR1Q8IX12 1150 aaKnown RBP20.23■□□□□ 0.83
HDAC11-202ENST00000402259 DOCK3Q8IZD9 2030 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 TRIM47Q96LD4 638 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 PORCNQ9H237 461 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 EFCC1Q9HA90 598 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 ZNF236Q9UL36 1845 aa20.23■□□□□ 0.83
HDAC11-202ENST00000402259 GOLGA8AA7E2F4 631 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 TNPO2O14787 897 aaKnown RBP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 RXRAP19793 462 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 HOXD10P28358 340 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 CAP1Q01518 475 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 SNRNP48Q6IEG0 339 aaKnown RBP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 CTU1Q7Z7A3 348 aaKnown RBP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 CPXCR1Q8N123 301 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 COA7Q96BR5 231 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 ARHGAP39Q9C0H5 1083 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 CPVLQ9H3G5 476 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
HDAC11-202ENST00000402259 HPS5Q9UPZ3 1129 aa20.22■□□□□ 0.83
HDAC11-202ENST00000402259 BAZ2BQ9UIF8 2168 aaKnown RBP20.21■□□□□ 0.83
HDAC11-202ENST00000402259 PLXNB2O15031 1838 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 CYTH3O43739 400 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 STRNO43815 780 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 ERCC3P19447 782 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 PDIA3P30101 505 aaKnown RBP20.21■□□□□ 0.83
HDAC11-202ENST00000402259 AK2P54819 239 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 CDC37Q16543 378 aaPredicted RBP20.21■□□□□ 0.83
HDAC11-202ENST00000402259 SLC35G1Q2M3R5 365 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 GPR142Q7Z601 462 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 PLEKHH3Q7Z736 793 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
HDAC11-202ENST00000402259 ZBTB5O15062 677 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
HDAC11-202ENST00000402259 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 TRAF1Q13077 416 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
HDAC11-202ENST00000402259 CCDC174Q6PII3 467 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 NCAPG2Q86XI2 1143 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 RAB11FIP4Q86YS3 637 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 ABRAQ8N0Z2 381 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 SRBD1Q8N5C6 995 aaKnown RBP20.2■□□□□ 0.82
HDAC11-202ENST00000402259 SOCS4Q8WXH5 440 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-202ENST00000402259 SRRDQ9UH36 339 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 CCPG1Q9ULG6 757 aa20.2■□□□□ 0.82
HDAC11-202ENST00000402259 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-202ENST00000402259 SLC15A5A6NIM6 579 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 PTPREP23469 700 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 SNAP25P60880 206 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 QRICH1Q2TAL8 776 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 AGBL1Q96MI9 1066 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 MAF1Q9H063 256 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
HDAC11-202ENST00000402259 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 IVNS1ABPQ9Y6Y0 642 aa20.19■□□□□ 0.82
HDAC11-202ENST00000402259 CDC27P30260 824 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 FUT2Q10981 343 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 GRB14Q14449 540 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
HDAC11-202ENST00000402259 VAT1LQ9HCJ6 419 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 GJD2Q9UKL4 321 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 SMCHD1A6NHR9 2005 aa20.18■□□□□ 0.82
HDAC11-202ENST00000402259 ZNFX1Q9P2E3 1918 aaKnown RBP20.17■□□□□ 0.82
HDAC11-202ENST00000402259 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 IRF5Q13568 498 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 MORN1Q5T089 497 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 WDR78Q5VTH9 848 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 USP6NLQ92738 828 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 PIGSQ96S52 555 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 NUDT12Q9BQG2 462 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 AMNQ9BXJ7 453 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 ACAD9Q9H845 621 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 RNF146Q9NTX7 359 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 ABCB11O95342 1321 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
HDAC11-202ENST00000402259 PFKFB2O60825 505 aa20.16■□□□□ 0.82
HDAC11-202ENST00000402259 FCER1AP12319 257 aa20.16■□□□□ 0.82
HDAC11-202ENST00000402259 ALAS1P13196 640 aa20.16■□□□□ 0.82
HDAC11-202ENST00000402259 ADD1P35611 737 aaKnown RBP20.16■□□□□ 0.82
HDAC11-202ENST00000402259 TRERF1Q96PN7 1200 aa20.16■□□□□ 0.82
HDAC11-202ENST00000402259 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
HDAC11-202ENST00000402259 PTPN22Q9Y2R2 807 aa20.16■□□□□ 0.82
HDAC11-202ENST00000402259 ST18O60284 1047 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 IFNAR1P17181 557 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 PRKCZQ05513 592 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 KCTD2Q14681 263 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 NTRK3Q16288 839 aa20.15■□□□□ 0.82
HDAC11-202ENST00000402259 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms