RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RASGRP4Q8TDF6 673 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 CCDC12Q8WUD4 166 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-204ENST00000397443 GDPD2Q9HCC8 539 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 CEBPZQ03701 1054 aaKnown RBP24.35■■□□□ 1.49
CPNE1-204ENST00000397443 WNK4Q96J92 1243 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 AMNQ9BXJ7 453 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 TFIP11Q9UBB9 837 aaKnown RBP24.35■■□□□ 1.49
CPNE1-204ENST00000397443 PPP1R9AQ9ULJ8 1098 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 KCNH4Q9UQ05 1017 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 CNPY2Q9Y2B0 182 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 SMCHD1A6NHR9 2005 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 CALML3P27482 149 aa24.34■■□□□ 1.49
CPNE1-204ENST00000397443 CPXCR1Q8N123 301 aa24.34■■□□□ 1.49
CPNE1-204ENST00000397443 ATG4CQ96DT6 458 aa24.34■■□□□ 1.49
CPNE1-204ENST00000397443 RANBP17Q9H2T7 1088 aaKnown RBP24.34■■□□□ 1.49
CPNE1-204ENST00000397443 hCG_1984214I3L0E3 225 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 U2AF2P26368 475 aaKnown RBP eCLIP24.33■■□□□ 1.499e-27■■■■□ 22.3
CPNE1-204ENST00000397443 NOM1Q5C9Z4 860 aaKnown RBP24.33■■□□□ 1.49
CPNE1-204ENST00000397443 CATSPERGQ6ZRH7 1159 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 NOSTRINQ8IVI9 506 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 BLIDQ8IZY5 108 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 ZNF713Q8N859 430 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-204ENST00000397443 FTOQ9C0B1 505 aaKnown RBP eCLIP24.33■■□□□ 1.495e-10■□□□□ 9.7
CPNE1-204ENST00000397443 FOXP1Q9H334 677 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-204ENST00000397443 PCDHA4Q9UN74 947 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 CTDP1Q9Y5B0 961 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-204ENST00000397443 PASKQ96RG2 1323 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 FAM205CA6NFA0 338 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L15C9J2P7 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L13C9JLJ4 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L11C9JVI0 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L18D6R9N7 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L22D6RA61 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L17D6RBQ6 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L19D6RCP7 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L20D6RJB6 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 USP17L24Q0WX57 530 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 NFKBIBQ15653 356 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 BRAPQ7Z569 592 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 RGS22Q8NE09 1264 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 ZMYND12Q9H0C1 365 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 C6orf50Q9HD87 102 aa24.33■■□□□ 1.49
CPNE1-204ENST00000397443 UNCXA6NJT0 531 aa24.32■■□□□ 1.48
CPNE1-204ENST00000397443 FIBPO43427 364 aa24.32■■□□□ 1.48
CPNE1-204ENST00000397443 SNAPC2Q13487 334 aa24.32■■□□□ 1.48
CPNE1-204ENST00000397443 EARS2Q5JPH6 523 aaKnown RBP24.32■■□□□ 1.48
CPNE1-204ENST00000397443 ADCY7P51828 1080 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 COG2Q14746 738 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 TPRNQ4KMQ1 711 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 AGBL1Q96MI9 1066 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 RAVER2Q9HCJ3 691 aaKnown RBP24.31■■□□□ 1.48
CPNE1-204ENST00000397443 ATP2B1P20020 1258 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 GNA11P29992 359 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 MYSM1Q5VVJ2 828 aa24.31■■□□□ 1.48
CPNE1-204ENST00000397443 PROCA1Q8NCQ7 364 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-204ENST00000397443 VWA5AO00534 786 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 DSG3P32926 999 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 MCM4P33991 863 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 CLEC17AQ6ZS10 378 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 PIK3AP1Q6ZUJ8 805 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 ZNF784Q8NCA9 323 aaPredicted RBP24.3■■□□□ 1.48
CPNE1-204ENST00000397443 BIN2Q9UBW5 565 aaPredicted RBP24.3■■□□□ 1.48
CPNE1-204ENST00000397443 CCPG1Q9ULG6 757 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 PARP14Q460N5 1801 aa24.3■■□□□ 1.48
CPNE1-204ENST00000397443 ZBED4O75132 1171 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 TOMM70O94826 608 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 ZNF157P51786 506 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-204ENST00000397443 KRT85P78386 507 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 UBE2SQ16763 222 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 PPP1R18Q6NYC8 613 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 PSTPIP2Q9H939 334 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 SLC38A10Q9HBR0 1119 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 IRX3P78415 501 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-204ENST00000397443 MOGSQ13724 837 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 NBR1Q14596 966 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 JAKMIP3Q5VZ66 844 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 FASTKD5Q7L8L6 764 aaKnown RBP24.29■■□□□ 1.48
CPNE1-204ENST00000397443 SAPCD2Q86UD0 394 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 HOMER2Q9NSB8 354 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 TMEM260Q9NX78 707 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 ABT1Q9ULW3 272 aaKnown RBP24.29■■□□□ 1.48
CPNE1-204ENST00000397443 PCDHA6Q9UN73 950 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 PCDHA8Q9Y5H6 950 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 LOC285556D6RIA3 1793 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 RLFQ13129 1914 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 MYH15Q9Y2K3 1946 aa24.29■■□□□ 1.48
CPNE1-204ENST00000397443 ZNF536O15090 1300 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 SPRYD7Q5W111 196 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 GALNT17Q6IS24 598 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 REXO1Q8N1G1 1221 aaKnown RBP24.28■■□□□ 1.48
CPNE1-204ENST00000397443 DAGLBQ8NCG7 672 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 CUL5Q93034 780 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 TNFRSF25Q93038 417 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 USP28Q96RU2 1077 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 AGTPBP1Q9UPW5 1226 aa24.28■■□□□ 1.48
CPNE1-204ENST00000397443 ESYT2A0FGR8 921 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 SPDYE16A6NNV3 312 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-204ENST00000397443 ICAM1P05362 532 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 USP17L6PQ6QN14 398 aa24.27■■□□□ 1.48
CPNE1-204ENST00000397443 PGBD1Q96JS3 809 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms