RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ATL3Q6DD88 541 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 PPP1R18Q6NYC8 613 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 TMEM87AQ8NBN3 555 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 USP28Q96RU2 1077 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 FTOQ9C0B1 505 aaKnown RBP eCLIP31.59■■■□□ 2.655e-10■□□□□ 9.7
CPNE1-203ENST00000397442 TANGO6Q9C0B7 1094 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 LMBRD1Q9NUN5 540 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 RLFQ13129 1914 aa31.59■■■□□ 2.65
CPNE1-203ENST00000397442 SMCO2A6NFE2 343 aa31.58■■■□□ 2.65
CPNE1-203ENST00000397442 GOLGA6L22H0YM25 854 aa31.58■■■□□ 2.65
CPNE1-203ENST00000397442 FIBPO43427 364 aa31.58■■■□□ 2.65
CPNE1-203ENST00000397442 SLF1Q9BQI6 1058 aa31.58■■■□□ 2.65
CPNE1-203ENST00000397442 CELF2O95319 508 aaKnown RBP31.57■■■□□ 2.65
CPNE1-203ENST00000397442 NOM1Q5C9Z4 860 aaKnown RBP31.57■■■□□ 2.65
CPNE1-203ENST00000397442 PRPF38AQ8NAV1 312 aaKnown RBP31.57■■■□□ 2.65
CPNE1-203ENST00000397442 ZNF396Q96N95 335 aaPredicted RBP31.57■■■□□ 2.65
CPNE1-203ENST00000397442 AMNQ9BXJ7 453 aa31.57■■■□□ 2.65
CPNE1-203ENST00000397442 GBA2Q9HCG7 927 aaPredicted RBP31.57■■■□□ 2.65
CPNE1-203ENST00000397442 TMOD4Q9NZQ9 345 aa31.57■■■□□ 2.65
CPNE1-203ENST00000397442 PCDHA1Q9Y5I3 950 aa31.57■■■□□ 2.65
CPNE1-203ENST00000397442 FAM205CA6NFA0 338 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 PPIL2Q13356 520 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 FBXO11Q86XK2 927 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 C6orf50Q9HD87 102 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 KCNH4Q9UQ05 1017 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 LOC285556D6RIA3 1793 aa31.57■■■□□ 2.64
CPNE1-203ENST00000397442 PRPF40AO75400 957 aaKnown RBP31.56■■■□□ 2.64
CPNE1-203ENST00000397442 OPTNQ96CV9 577 aa31.56■■■□□ 2.64
CPNE1-203ENST00000397442 CFAP45Q9UL16 551 aa31.56■■■□□ 2.64
CPNE1-203ENST00000397442 SMCHD1A6NHR9 2005 aa31.56■■■□□ 2.64
CPNE1-203ENST00000397442 FLOT1O75955 427 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 GNA11P29992 359 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 TOB1P50616 345 aaPredicted RBP31.55■■■□□ 2.64
CPNE1-203ENST00000397442 CST9Q5W186 159 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 PPP1R9AQ9ULJ8 1098 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 PCDHA6Q9UN73 950 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 PCDHA8Q9Y5H6 950 aa31.55■■■□□ 2.64
CPNE1-203ENST00000397442 A0A0G2JLL6 359 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-203ENST00000397442 CXCL11O14625 94 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 NBR1Q14596 966 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 PRRT2Q7Z6L0 340 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-203ENST00000397442 RASGRP4Q8TDF6 673 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 SCAND2PQ9GZW5 306 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-203ENST00000397442 TRPM7Q96QT4 1865 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 GJA5P36382 358 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 SAMD1Q6SPF0 538 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-203ENST00000397442 LEO1Q8WVC0 666 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-203ENST00000397442 RTEL1Q9NZ71 1219 aa31.54■■■□□ 2.64
CPNE1-203ENST00000397442 TAL1P17542 331 aaPredicted RBP31.53■■■□□ 2.64
CPNE1-203ENST00000397442 CEBPZQ03701 1054 aaKnown RBP31.53■■■□□ 2.64
CPNE1-203ENST00000397442 CATSPERGQ6ZRH7 1159 aa31.53■■■□□ 2.64
CPNE1-203ENST00000397442 SLC10A4Q96EP9 437 aa31.53■■■□□ 2.64
CPNE1-203ENST00000397442 GPBP1L1Q9HC44 474 aaPredicted RBP31.53■■■□□ 2.64
CPNE1-203ENST00000397442 RIC8AQ9NPQ8 531 aa31.53■■■□□ 2.64
CPNE1-203ENST00000397442 POLR3EQ9NVU0 708 aa31.53■■■□□ 2.64
CPNE1-203ENST00000397442 CLIC4Q9Y696 253 aa31.53■■■□□ 2.64
CPNE1-203ENST00000397442 ADCY7P51828 1080 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 USH1GQ495M9 461 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 CCDC174Q6PII3 467 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 C2orf69Q8N8R5 385 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 RCOR1Q9UKL0 485 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 ZNF536O15090 1300 aa31.52■■■□□ 2.64
CPNE1-203ENST00000397442 NASPP49321 788 aaPredicted RBP31.51■■■□□ 2.64
CPNE1-203ENST00000397442 RILPL1Q5EBL4 403 aa31.51■■■□□ 2.64
CPNE1-203ENST00000397442 SPATA32Q96LK8 384 aa31.51■■■□□ 2.64
CPNE1-203ENST00000397442 SLC38A10Q9HBR0 1119 aa31.51■■■□□ 2.64
CPNE1-203ENST00000397442 ELP1O95163 1332 aa31.51■■■□□ 2.63
CPNE1-203ENST00000397442 TREML2Q5T2D2 321 aa31.51■■■□□ 2.63
CPNE1-203ENST00000397442 PIK3AP1Q6ZUJ8 805 aa31.51■■■□□ 2.63
CPNE1-203ENST00000397442 BICD2Q8TD16 824 aa31.51■■■□□ 2.63
CPNE1-203ENST00000397442 MOGSQ13724 837 aa31.5■■■□□ 2.63
CPNE1-203ENST00000397442 ANO1Q5XXA6 986 aa31.5■■■□□ 2.63
CPNE1-203ENST00000397442 PROCA1Q8NCQ7 364 aaPredicted RBP31.5■■■□□ 2.63
CPNE1-203ENST00000397442 PSTPIP2Q9H939 334 aa31.5■■■□□ 2.63
CPNE1-203ENST00000397442 ADAMTS5Q9UNA0 930 aa31.5■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L15C9J2P7 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L13C9JLJ4 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L11C9JVI0 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L18D6R9N7 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L22D6RA61 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L17D6RBQ6 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L19D6RCP7 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L20D6RJB6 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 KIF3CO14782 793 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 OPLAHO14841 1288 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 USP17L24Q0WX57 530 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 REXO1Q8N1G1 1221 aaKnown RBP31.49■■■□□ 2.63
CPNE1-203ENST00000397442 ATG4CQ96DT6 458 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 WNK4Q96J92 1243 aa31.49■■■□□ 2.63
CPNE1-203ENST00000397442 GADD45BO75293 160 aaPredicted RBP31.48■■■□□ 2.63
CPNE1-203ENST00000397442 ICAM1P05362 532 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 PTMSP20962 102 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 DSG3P32926 999 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 CLK2P49760 499 aaKnown RBP31.48■■■□□ 2.63
CPNE1-203ENST00000397442 COG2Q14746 738 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 CSPP1Q1MSJ5 1256 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 LINC00301Q8NCQ3 95 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 CUL5Q93034 780 aa31.48■■■□□ 2.63
CPNE1-203ENST00000397442 BIN2Q9UBW5 565 aaPredicted RBP31.48■■■□□ 2.63
CPNE1-203ENST00000397442 VWA5AO00534 786 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms