RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 SIN3AQ96ST3 1273 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 ARPC5LQ9BPX5 153 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TRAIPQ9BWF2 469 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 IRF2BPLQ9H1B7 796 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 RSPH9Q9H1X1 276 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 ZNHIT6Q9NWK9 470 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TLR7Q9NYK1 1049 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 IL20Q9NYY1 176 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 TMOD4Q9NZQ9 345 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 PAIP2BQ9ULR5 123 aaKnown RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 AMOTL2Q9Y2J4 779 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 MAFBQ9Y5Q3 323 aaPredicted RBP4.1□□□□□ -1.75
XRCC4-203ENST00000396027 IKBKGQ9Y6K9 419 aa4.1□□□□□ -1.75
XRCC4-203ENST00000396027 USP19O94966 1318 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 UACAQ9BZF9 1416 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 CAMSAP2Q08AD1 1489 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 FAM95CA0A1B0GW59 222 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GOLGA6L4A6NEF3 574 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GOLGA8AA7E2F4 631 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ZSCAN9O15535 394 aaPredicted RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 DNAJC8O75937 253 aaPredicted RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 KIAA0754O94854 1291 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 DKK1O94907 266 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 TRIM37O94972 964 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 EIF2S1P05198 315 aaKnown RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 TROVE2P10155 538 aaKnown RBP eCLIP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GPTP24298 496 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GCKP35557 465 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GCLCP48506 637 aaPredicted RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 CYP27A1Q02318 531 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 SEPT6Q14141 434 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 RRP12Q5JTH9 1297 aaKnown RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC122Q5T0U0 273 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 CIAPIN1Q6FI81 312 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 FAM117BQ6P1L5 589 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 SLC30A9Q6PML9 568 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 KRT25Q7Z3Z0 450 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 UBE2Q1Q7Z7E8 422 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 SESTD1Q86VW0 696 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 LSRQ86X29 649 aaPredicted RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ZSWIM9Q86XI8 627 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 LRRC43Q8N309 656 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 AFAP1Q8N556 730 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 VPS37AQ8NEZ2 397 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ATL2Q8NHH9 583 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GAS2L2Q8NHY3 880 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 HNRNPLLQ8WVV9 542 aaKnown RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GFM2Q969S9 779 aaKnown RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 CHMP4CQ96CF2 233 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 IFT43Q96FT9 208 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 MAML3Q96JK9 1138 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 GDAP1L1Q96MZ0 367 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ZMAT2Q96NC0 199 aaKnown RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ALS2CR12Q96Q35 445 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 UBXN6Q9BZV1 441 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 TSPAN10Q9H1Z9 355 aaPredicted RBP4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ATP6V0A4Q9HBG4 840 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ARFGAP3Q9NP61 516 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 SLAIN2Q9P270 581 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ZNF148Q9UQR1 794 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ATP6V0A2Q9Y487 856 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 ATP6V1DQ9Y5K8 247 aa4.09□□□□□ -1.75
XRCC4-203ENST00000396027 REREQ9P2R6 1566 aa4.09□□□□□ -1.76
XRCC4-203ENST00000396027 EVC2Q86UK5 1308 aa4.09□□□□□ -1.76
XRCC4-203ENST00000396027 ERICH2A1L162 156 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 SRRM3A6NNA2 597 aaPredicted RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 EFCAB8A8MWE9 144 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 FAM25EA8MYX2 175 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TM4SF5O14894 197 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 LSM1O15116 133 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TIMM44O43615 452 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 MARCH6O60337 910 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 STK10O94804 968 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 RNASE1P07998 156 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 DESP17661 470 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TARSP26639 723 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 GBP2P32456 591 aaPredicted RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 NUCB1Q02818 461 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 ZBTB17Q13105 803 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 PSMD2Q13200 908 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 PABPC4Q13310 644 aaKnown RBP eCLIP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 LAMB3Q13751 1172 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TRIM29Q14134 588 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 KIF4BQ2VIQ3 1234 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TBC1D25Q3MII6 688 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 SGO2Q562F6 1265 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC158Q5M9N0 1113 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 ZAR1Q86SH2 424 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 MYLK4Q86YV6 388 aaPredicted RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 ITPRIPQ8IWB1 547 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 LMNTD2Q8IXW0 634 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 PEX5LQ8IYB4 626 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 TEX9Q8N6V9 391 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 SMYD1Q8NB12 490 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 PPP1R14CQ8TAE6 165 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 RTF1Q92541 710 aaKnown RBP4.08□□□□□ -1.76
XRCC4-203ENST00000396027 UBXN4Q92575 508 aa4.08□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC47Q96A33 483 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms