RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
PHTF1-205ENST00000393357 IRF2BP1Q8IU81 584 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 GPR108Q9NPR9 543 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 AATFQ9NY61 560 aaKnown RBP eCLIP18.24■□□□□ 0.51
PHTF1-205ENST00000393357 SUFUQ9UMX1 484 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
PHTF1-205ENST00000393357 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 FCER1AP12319 257 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 CEP85LQ5SZL2 805 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 RRAGAQ7L523 313 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
PHTF1-205ENST00000393357 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 TMOD1P28289 359 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 IL17AQ16552 155 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 KRT12Q99456 494 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 TRIM31Q9BZY9 425 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 PDHBP11177 359 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 CDC25CP30307 473 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 UBA7P41226 1012 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 PAFAH1B1P43034 410 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
PHTF1-205ENST00000393357 DYMQ7RTS9 669 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 KSR1Q8IVT5 923 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 SLC39A2Q9NP94 309 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 GOLGA6L7A0A1B0GV03 622 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 PSMD14O00487 310 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 EPHB6O15197 1021 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 CDR1P51861 262 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 GFPT1Q06210 699 aaPredicted RBP18.23■□□□□ 0.51
PHTF1-205ENST00000393357 DDX42Q86XP3 938 aaKnown RBP eCLIP18.23■□□□□ 0.51
PHTF1-205ENST00000393357 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 KRT23Q9C075 422 aa18.23■□□□□ 0.51
PHTF1-205ENST00000393357 TOPAZ1Q8N9V7 1692 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 ZNF263O14978 683 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 PPP1R12BO60237 982 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 TACC1O75410 805 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 MCM3P25205 808 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 ASIC1P78348 528 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 N4BP2L2Q92802 583 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 RWDD2AQ9UIY3 292 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 GRIN2DO15399 1336 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 GLI1P08151 1106 aa18.22■□□□□ 0.51
PHTF1-205ENST00000393357 AARSP49588 968 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
PHTF1-205ENST00000393357 HEXIM1O94992 359 aaKnown RBP18.21■□□□□ 0.51
PHTF1-205ENST00000393357 LIFRP42702 1097 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 SPAG1Q07617 926 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 PDE4DQ08499 809 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 TUBB2AQ13885 445 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 KIF6Q6ZMV9 814 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 CATIPQ7Z7H3 387 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 CABS1Q96KC9 395 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 TUBB2BQ9BVA1 445 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
PHTF1-205ENST00000393357 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
PHTF1-205ENST00000393357 OPA1O60313 960 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 SPATA20Q8TB22 786 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 CNOT6LQ96LI5 555 aaKnown RBP18.21■□□□□ 0.51
PHTF1-205ENST00000393357 CACNA2D4Q7Z3S7 1137 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
PHTF1-205ENST00000393357 OSBPL9Q96SU4 736 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 YY1AP1Q9H869 796 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 MYO1AQ9UBC5 1043 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 SALL4Q9UJQ4 1053 aa18.21■□□□□ 0.51
PHTF1-205ENST00000393357 MYH10P35580 1976 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 PSMA7O14818 248 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 LRRC41Q15345 812 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 PKN1Q16512 942 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
PHTF1-205ENST00000393357 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
PHTF1-205ENST00000393357 CREG2Q8IUH2 290 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 UHMK1Q8TAS1 419 aaKnown RBP18.2■□□□□ 0.5
PHTF1-205ENST00000393357 GGT7Q9UJ14 662 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 USO1O60763 962 aaKnown RBP18.2■□□□□ 0.5
PHTF1-205ENST00000393357 MAGEA1P43355 309 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 VAV2P52735 878 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 EHHADHQ08426 723 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 INF2Q27J81 1249 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
PHTF1-205ENST00000393357 EXOC1Q9NV70 894 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
PHTF1-205ENST00000393357 LSP1P33241 339 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 USP8P40818 1118 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 PPP2R5AQ15172 486 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 VIPAS39Q9H9C1 493 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 LGALS16A8MUM7 142 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 OPLAHO14841 1288 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 CIAO1O76071 339 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 PDE8BO95263 885 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 CCDC172P0C7W6 258 aa18.19■□□□□ 0.5
PHTF1-205ENST00000393357 NAA35Q5VZE5 725 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms