RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 TUBB4AP04350 444 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 BRD3Q15059 726 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 SPTY2D1Q68D10 685 aaPredicted RBP12.69□□□□□ -0.38
SPOP-202ENST00000393328 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 TEX11Q8IYF3 940 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 KAT14Q9H8E8 782 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 TMTC3Q6ZXV5 915 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
SPOP-202ENST00000393328 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
SPOP-202ENST00000393328 STK36Q9NRP7 1315 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
SPOP-202ENST00000393328 CTAGE15A4D2H0 777 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 MCM7P33993 719 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 CTAGE6Q86UF2 777 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 RNF26Q9BY78 433 aaPredicted RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 ERLIN1O75477 346 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 APBA3O96018 575 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 KRT2P35908 639 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 KCNQ5Q9NR82 932 aa12.68□□□□□ -0.38
SPOP-202ENST00000393328 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
SPOP-202ENST00000393328 RAD21O60216 631 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 PPP6R2O75170 966 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 BAG3O95817 575 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 CCT5P48643 541 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 ZNF622Q969S3 477 aaKnown RBP eCLIP12.67□□□□□ -0.387e-6■■□□□ 12.8
SPOP-202ENST00000393328 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
SPOP-202ENST00000393328 SAMM50Q9Y512 469 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 POLRMTO00411 1230 aaKnown RBP12.67□□□□□ -0.38
SPOP-202ENST00000393328 XBP1P17861 261 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.384e-7■■■■■ 40.6
SPOP-202ENST00000393328 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 FBXW10Q5XX13 1052 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 PSMB7Q99436 277 aa12.67□□□□□ -0.38
SPOP-202ENST00000393328 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
SPOP-202ENST00000393328 CNTNAP5Q8WYK1 1306 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 A0A087X0B3 334 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 IVLP07476 585 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 MAGEA9P43362 315 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 PLIN2Q99541 437 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 CHP1Q99653 195 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 G3V3G9 751 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 ZNF185O15231 689 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
SPOP-202ENST00000393328 CACNB3P54284 484 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 NR1I3Q14994 352 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
SPOP-202ENST00000393328 CEP112Q8N8E3 955 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
SPOP-202ENST00000393328 TAB2Q9NYJ8 693 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 PCDHAC2Q9Y5I4 1007 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 ORC4O43929 436 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 PTPREP23469 700 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 ERVK-24P63145 666 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 EP400NLQ6ZTU2 488 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 UBA5Q9GZZ9 404 aa12.66□□□□□ -0.38
SPOP-202ENST00000393328 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
SPOP-202ENST00000393328 MYBL2P10244 700 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 SCG2P13521 617 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 ZNF18P17022 549 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
SPOP-202ENST00000393328 PTGDRQ13258 359 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 SLC35G1Q2M3R5 365 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 UIMC1Q96RL1 719 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 DBNDD1Q9H9R9 158 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 MYH6P13533 1939 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
SPOP-202ENST00000393328 GYPCP04921 128 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 MMP10P09238 476 aa12.65□□□□□ -0.38
SPOP-202ENST00000393328 GGCXP38435 758 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms