RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 BMP3P12645 472 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 MCCP23508 829 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 NT5C2P49902 561 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 TRDNQ13061 729 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 IKQ13123 557 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-202ENST00000380747 PLS1Q14651 629 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 IQCA1Q86XH1 822 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 SLF1Q9BQI6 1058 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 LSG1Q9H089 658 aaKnown RBP10.86□□□□□ -0.67
HMGN1-202ENST00000380747 PORCNQ9H237 461 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 ZSWIM5Q9P217 1185 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
HMGN1-202ENST00000380747 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-202ENST00000380747 TMEM232C9JQI7 657 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 MAPK4P31152 587 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 SLC1A4P43007 532 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 NOVP48745 357 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 FLT3LGP49771 235 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 IRF5Q13568 498 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 PLEKHH3Q7Z736 793 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
HMGN1-202ENST00000380747 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 TTC14Q96N46 770 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 ZSCAN10Q96SZ4 725 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-202ENST00000380747 UBAC1Q9BSL1 405 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 PAK6Q9NQU5 681 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-202ENST00000380747 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-202ENST00000380747 FEM1BQ9UK73 627 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
HMGN1-202ENST00000380747 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 E7EWF7 191 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 VWA5AO00534 786 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 SOX1O00570 391 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-202ENST00000380747 BMP8BP34820 402 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 RCSD1Q6JBY9 416 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 STOX1Q6ZVD7 989 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 KCTD1Q719H9 257 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 RASGRP2Q7LDG7 609 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 NCAPG2Q86XI2 1143 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 DGKHQ86XP1 1220 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 PRPF38AQ8NAV1 312 aaKnown RBP10.84□□□□□ -0.67
HMGN1-202ENST00000380747 NCOA7Q8NI08 942 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 MOV10L1Q9BXT6 1211 aaKnown RBP10.84□□□□□ -0.67
HMGN1-202ENST00000380747 SPATC1LQ9H0A9 340 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
HMGN1-202ENST00000380747 TNKSO95271 1327 aa10.84□□□□□ -0.67
HMGN1-202ENST00000380747 FRMPD2Q68DX3 1309 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-202ENST00000380747 SLC27A2O14975 620 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ADCY3O60266 1144 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ZBED4O75132 1171 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ELNP15502 786 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ERCC3P19447 782 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 CYP2B6P20813 491 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 STAT2P52630 851 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 CREB3L3Q68CJ9 461 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 CPXCR1Q8N123 301 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ENAHQ8N8S7 591 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-202ENST00000380747 SHCBP1Q8NEM2 672 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 CHURC1Q8WUH1 139 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 DCAF4Q8WV16 495 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 GDF15Q99988 308 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 KAT14Q9H8E8 782 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 GPCPD1Q9NPB8 672 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 ADAMTS5Q9UNA0 930 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
HMGN1-202ENST00000380747 MYH4Q9Y623 1939 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 ERICH2A1L162 156 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 SLC25A27O95847 323 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 INHAP05111 366 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 PTPREP23469 700 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 STAT3P40763 770 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 NECTIN1Q15223 517 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
HMGN1-202ENST00000380747 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 LHX8Q68G74 356 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 TTBK2Q6IQ55 1244 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 CHST3Q7LGC8 479 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 PNMA1Q8ND90 353 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 SOCS4Q8WXH5 440 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 LRCH3Q96II8 777 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 MROH8Q9H579 483 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
HMGN1-202ENST00000380747 GJD2Q9UKL4 321 aa10.82□□□□□ -0.68
HMGN1-202ENST00000380747 DNAH12Q6ZR08 3092 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms