RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 C2orf54Q08AI8 447 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 GLE1Q53GS7 698 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 PRR16Q569H4 304 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 REXO1Q8N1G1 1221 aaKnown RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 DRC3Q9H069 523 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 ARMCX3Q9UH62 379 aaPredicted RBP18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 LAD1O00515 517 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 DAPK3O43293 454 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 HSPA6P17066 643 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 ARHGAP44Q17R89 818 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 CTAGE3PQ8IX95 158 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
COL4A3BP-203ENST00000380494 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 PGRMC1O00264 195 aaKnown RBP18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 MYL1P05976 194 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZNF827Q17R98 1081 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 TSC22D3Q99576 134 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 FOXP1Q9H334 677 aaPredicted RBP18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 ENC1O14682 589 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 PDE8AO60658 829 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CTNND1O60716 968 aaKnown RBP18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 RASSF7Q02833 373 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 EHHADHQ08426 723 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CUL1Q13616 776 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CNOT6LQ96LI5 555 aaKnown RBP18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 HAUS7Q99871 368 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 WDR62O43379 1518 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CHMP2AO43633 222 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 SH3BP5O60239 455 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 CASC4Q6P4E1 433 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 BACH1O14867 736 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 KRT3P12035 628 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 ABCB4P21439 1286 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 HOMEZQ8IX15 550 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 TUBGCP2Q9BSJ2 902 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
COL4A3BP-203ENST00000380494 SATB1Q01826 763 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PPARAQ07869 468 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 E2F4Q16254 413 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 HAUS1Q96CS2 278 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PCDHA5Q9Y5H7 936 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 DDAH1O94760 285 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 RBM26Q5T8P6 1007 aaKnown RBP18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 CC2D1AQ6P1N0 951 aaPredicted RBP18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 DAAM1Q9Y4D1 1078 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PCDHB13Q9Y5F0 798 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 RNF8O76064 485 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 TRAPPC10P48553 1259 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 CLIC6Q96NY7 704 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 RWDD2AQ9UIY3 292 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PANK4Q9NVE7 773 aa18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 ARPP21Q9UBL0 812 aaPredicted RBP18.69■□□□□ 0.58
COL4A3BP-203ENST00000380494 PTPRTO14522 1441 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 HADHQ16836 314 aaKnown RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 F8W031 263 aaPredicted RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 PDE6CP51160 858 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 SLC12A2P55011 1212 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 GPBP1Q86WP2 473 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 SPATA31E1Q6ZUB1 1445 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ESRRGP62508 458 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 DYNC1I2Q13409 638 aaKnown RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 SAAL1Q96ER3 474 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ATP10BO94823 1461 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 HSPD1P10809 573 aaKnown RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZAP70P43403 619 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZNF658Q5TYW1 1059 aaPredicted RBP18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
COL4A3BP-203ENST00000380494 GARSP41250 739 aaKnown RBP18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 FAM133BQ5BKY9 247 aaKnown RBP18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 ST13P4Q8IZP2 240 aaPredicted RBP18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 PDLIM2Q96JY6 352 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 ATP8A2Q9NTI2 1148 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 MAN1B1Q9UKM7 699 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 SYNMO15061 1565 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 GPIHBP1Q8IV16 184 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 HIBCHQ6NVY1 386 aaPredicted RBP18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 THAP9Q9H5L6 903 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 SOWAHDA6NJG2 315 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 BPIFA3Q9BQP9 254 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 SLFN12Q8IYM2 578 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 LRGUKQ96M69 825 aa18.67■□□□□ 0.58
COL4A3BP-203ENST00000380494 EPS15L1Q9UBC2 864 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms