RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 FAM160B2Q86V87 743 aa21.79■■□□□ 1.08
PCDH8-202ENST00000377942 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
PCDH8-202ENST00000377942 TRPC6Q9Y210 931 aa21.79■■□□□ 1.08
PCDH8-202ENST00000377942 SLC17A8Q8NDX2 589 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 PTPRMP28827 1452 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 OSBPP22059 807 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 FAM26FQ5R3K3 315 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 ADD3Q9UEY8 706 aaKnown RBP21.78■■□□□ 1.08
PCDH8-202ENST00000377942 ARMCX3Q9UH62 379 aaPredicted RBP21.78■■□□□ 1.08
PCDH8-202ENST00000377942 TNNI1P19237 187 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 CCDC14Q49A88 953 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
PCDH8-202ENST00000377942 NSRP1Q9H0G5 558 aaKnown RBP21.78■■□□□ 1.08
PCDH8-202ENST00000377942 VPS72Q15906 364 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 ARMC9Q7Z3E5 817 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 SYMPKQ92797 1274 aaKnown RBP21.77■■□□□ 1.08
PCDH8-202ENST00000377942 CLIC4Q9Y696 253 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 SOS2Q07890 1332 aaPredicted RBP21.77■■□□□ 1.08
PCDH8-202ENST00000377942 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 SYCE1Q8N0S2 351 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.77■■□□□ 1.08
PCDH8-202ENST00000377942 TSKSQ9UJT2 592 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 MORC3Q14149 939 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 ARFGAP2Q8N6H7 521 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 CDHR1Q96JP9 859 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 TIGD1Q96MW7 591 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 ATF5Q9Y2D1 282 aaPredicted RBP21.77■■□□□ 1.08
PCDH8-202ENST00000377942 ZC3H13Q5T200 1668 aaKnown RBP21.77■■□□□ 1.08
PCDH8-202ENST00000377942 KCNJ18B7U540 433 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 CDK8P49336 464 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 KCNJ12Q14500 433 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 GSDMAQ96QA5 445 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 CTTNBP2NLQ9P2B4 639 aa21.77■■□□□ 1.08
PCDH8-202ENST00000377942 PRPF6O94906 941 aaKnown RBP21.76■■□□□ 1.07
PCDH8-202ENST00000377942 RPN1P04843 607 aaKnown RBP21.76■■□□□ 1.07
PCDH8-202ENST00000377942 FERP16591 822 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 RNF187Q5TA31 235 aaPredicted RBP21.76■■□□□ 1.07
PCDH8-202ENST00000377942 TBC1D9BQ66K14 1250 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 MTA3Q9BTC8 594 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 AGTPBP1Q9UPW5 1226 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 STAT2P52630 851 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 SPICE1Q8N0Z3 855 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 ATP6V0A1Q93050 837 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 GDF11O95390 407 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 MMP1P03956 469 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 CD19P15391 556 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 TMOD1P28289 359 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 LIG4P49917 911 aa21.76■■□□□ 1.07
PCDH8-202ENST00000377942 KIF23Q02241 960 aaPredicted RBP21.76■■□□□ 1.07
PCDH8-202ENST00000377942 JPH2Q9BR39 696 aaPredicted RBP21.76■■□□□ 1.07
PCDH8-202ENST00000377942 SYDE2Q5VT97 1194 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 LRCH2Q5VUJ6 765 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 CCDC114Q96M63 670 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 XPO4Q9C0E2 1151 aaKnown RBP21.75■■□□□ 1.07
PCDH8-202ENST00000377942 HOXA7P31268 230 aaPredicted RBP21.75■■□□□ 1.07
PCDH8-202ENST00000377942 SPATA1Q5VX52 437 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 KCTD1Q719H9 257 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 ADPGKQ9BRR6 497 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 CD209Q9NNX6 404 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 TMEM179Q6ZVK1 233 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 OR8K1Q8NGG5 319 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 STAG1Q8WVM7 1258 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 CLIC6Q96NY7 704 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 TXNDC16Q9P2K2 825 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 KRT19P08727 400 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 ERO1AQ96HE7 468 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 PIGSQ96S52 555 aa21.75■■□□□ 1.07
PCDH8-202ENST00000377942 K7ENM7 598 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 STAT1P42224 750 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 PPM1FP49593 454 aaPredicted RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 NDUFA8P51970 172 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 ARHGEF6Q15052 776 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 GPR161Q8N6U8 529 aaKnown RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 ACTN4O43707 911 aaKnown RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 IGSF3O75054 1194 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 DCUN1D2Q6PH85 259 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 IFT81Q8WYA0 676 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 ERCC5P28715 1186 aaPredicted RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 METTL13Q8N6R0 699 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 MYL1P05976 194 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 DMP1Q13316 513 aaPredicted RBP21.74■■□□□ 1.07
PCDH8-202ENST00000377942 OTUD6BQ8N6M0 293 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 DYNLL2Q96FJ2 89 aa21.74■■□□□ 1.07
PCDH8-202ENST00000377942 ADAMTS13Q76LX8 1427 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 CYP2J2P51589 502 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 PPP2R3AQ06190 1150 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 PPP2R5AQ15172 486 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 RRAGAQ7L523 313 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 FAM207AQ9NSI2 230 aaPredicted RBP21.73■■□□□ 1.07
PCDH8-202ENST00000377942 RHOXF2BP0C7M4 288 aa21.73■■□□□ 1.07
PCDH8-202ENST00000377942 IREB2P48200 963 aaKnown RBP21.73■■□□□ 1.07
PCDH8-202ENST00000377942 RHOXF2Q9BQY4 288 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms