RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 METTL16Q86W50 562 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 VPS52Q8N1B4 723 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 SPDL1Q96EA4 605 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.816e-6■■■■■ 48.1
CRNKL1-201ENST00000377327 PCDHA13Q9Y5I0 950 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 A0A1B0GTH6 734 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 M0R2C6 588 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 ATP1A1P05023 1023 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 LONP1P36776 959 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 TAF11Q15544 211 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 P3H4Q92791 437 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 DCAF5Q96JK2 942 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 KCND1Q9NSA2 647 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 MED23Q9ULK4 1368 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 TNFAIP3P21580 790 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 EIF4A3P38919 411 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 MYO1EQ12965 1108 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 TRIM65Q6PJ69 517 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 CCDC105Q8IYK2 499 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 PPP1R14CQ8TAE6 165 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 ZNF496Q96IT1 587 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 EPN3Q9H201 632 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 FOXN1O15353 648 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 TXKP42681 527 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 IRX1P78414 480 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 GUCY1A3Q02108 690 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 DHX9Q08211 1270 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 NR1I3Q14994 352 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 RASIP1Q5U651 963 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 SUGP1Q8IWZ8 645 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 FAM114A2Q9NRY5 505 aa9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 AATFQ9NY61 560 aaKnown RBP eCLIP9.98□□□□□ -0.81
CRNKL1-201ENST00000377327 SPOPO43791 374 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 CCNT1O60563 726 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 BIRC3Q13489 604 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 PTPROQ16827 1216 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 ARHGAP24Q8N264 748 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 UHMK1Q8TAS1 419 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 HVCN1Q96D96 273 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 LSM14BQ9BX40 385 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 ASIC3Q9UHC3 531 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 TPX2Q9ULW0 747 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 ATP8A1Q9Y2Q0 1164 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 TTC26A0AVF1 554 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 SH2B2O14492 632 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 CIB2O75838 187 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 BAG3O95817 575 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 KIF11P52732 1056 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 SATB1Q01826 763 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 WDR93Q6P2C0 686 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 KCNB2Q92953 911 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 RRP36Q96EU6 259 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 IRS4O14654 1257 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 GCP02774 474 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 TNNI2P48788 182 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 POLR2FP61218 127 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 SPATA4Q8NEY3 305 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 P2RX5Q93086 422 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 ATP6V1G3Q96LB4 118 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 TSC22D3Q99576 134 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 THAP9Q9H5L6 903 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 CD2APQ9Y5K6 639 aa9.97□□□□□ -0.81
CRNKL1-201ENST00000377327 MYO1FO00160 1098 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 FTCDO95954 541 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 PRR29P0C7W0 189 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 PDE6AP16499 860 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 ITGA6P23229 1130 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 SH3BGRP55822 239 aaPredicted RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 CUL1Q13616 776 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 CAPRIN2Q6IMN6 1127 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 HDAC9Q9UKV0 1011 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 LGALS16A8MUM7 142 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 EXOC5O00471 708 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 LDHCP07864 332 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 H2AFZP0C0S5 128 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 EIF3BP55884 814 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 CCDC152Q4G0S7 254 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 HERC4Q5GLZ8 1057 aaPredicted RBP9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 BICDL1Q6ZP65 573 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 STOX1Q6ZVD7 989 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 H2AFVQ71UI9 128 aa9.96□□□□□ -0.81
CRNKL1-201ENST00000377327 SH2D3CQ8N5H7 860 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms