RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PDIA3P30101 505 aaKnown RBP18.9■□□□□ 0.62
MCF2L-203ENST00000375604 TNFAIP1Q13829 316 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 UBE2SQ16763 222 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 ZBTB33Q86T24 672 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 RRAGDQ9NQL2 400 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-203ENST00000375604 RPN1P04843 607 aaKnown RBP18.9■□□□□ 0.62
MCF2L-203ENST00000375604 ARMCX5Q6P1M9 558 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-203ENST00000375604 SPATA24Q86W54 205 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
MCF2L-203ENST00000375604 ARPP19P56211 112 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 KIF22Q14807 665 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 SSH3Q8TE77 659 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 DPH5Q9H2P9 285 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.62
MCF2L-203ENST00000375604 CDC25AP30304 524 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 CACNB3P54284 484 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 PABPC4Q13310 644 aaKnown RBP eCLIP18.89■□□□□ 0.61
MCF2L-203ENST00000375604 SPC25Q9HBM1 224 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 DISC1Q9NRI5 854 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.89■□□□□ 0.614e-7■■■■□ 22.3
MCF2L-203ENST00000375604 PALM3A6NDB9 673 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-203ENST00000375604 DMP1Q13316 513 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-203ENST00000375604 CERS3Q8IU89 383 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 RXRBP28702 533 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 GOLGA6CA6NDK9 693 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 CLIC2O15247 247 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 GMNNO75496 209 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 GOLGA6DP0CG33 693 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 MARK3P27448 753 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 FYB2Q5VWT5 728 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 CTAGE3PQ8IX95 158 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 GOLGA6AQ9NYA3 693 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 PCDHA7Q9UN72 937 aa18.89■□□□□ 0.61
MCF2L-203ENST00000375604 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 PDE8BO95263 885 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 TNNC2P02585 160 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 HHATQ5VTY9 493 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 NME8Q8N427 588 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
MCF2L-203ENST00000375604 GTF2A1P52655 376 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-203ENST00000375604 DIXDC1Q155Q3 683 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 SND1Q7KZF4 910 aaKnown RBP eCLIP18.88■□□□□ 0.61
MCF2L-203ENST00000375604 POMGNT1Q8WZA1 660 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 PIGSQ96S52 555 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 STK24Q9Y6E0 443 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-203ENST00000375604 CIB2O75838 187 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 SLC4A1P02730 911 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 ZBTB8OSQ8IWT0 167 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 MYOM2P54296 1465 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 USP17L3A6NCW0 530 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 USP17L4A6NCW7 530 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 USP17L1Q7RTZ2 530 aa18.88■□□□□ 0.61
MCF2L-203ENST00000375604 USP17L2Q6R6M4 530 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 CCDC94Q9BW85 323 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 XDHP47989 1333 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ADAM9Q13443 819 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ANKRD13CQ8N6S4 541 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ZNF274Q96GC6 653 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 PARP2Q9UGN5 583 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 PFKFB2O60825 505 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 TSTA3Q13630 321 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 TTC19Q6DKK2 380 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 TTBK2Q6IQ55 1244 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 TMTC1Q8IUR5 882 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ARHGEF2Q92974 986 aaKnown RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-203ENST00000375604 TRIM50Q86XT4 487 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 SLFN12Q8IYM2 578 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 P4HA1P13674 534 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ADALQ6DHV7 355 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 DCLK2Q8N568 766 aa18.87■□□□□ 0.61
MCF2L-203ENST00000375604 ATP5DP30049 168 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 STMN2Q93045 179 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 PI4K2BQ8TCG2 481 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 KIAA1468Q9P260 1216 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 OATP04181 439 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 LRCH2Q5VUJ6 765 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 AMFRQ9UKV5 643 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 PALM2Q8IXS6 379 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 GSDMBQ8TAX9 411 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
MCF2L-203ENST00000375604 ADGBQ8N7X0 1667 aa18.86■□□□□ 0.61
MCF2L-203ENST00000375604 TMOD1P28289 359 aa18.85■□□□□ 0.61
MCF2L-203ENST00000375604 PDE6CP51160 858 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms